Gene name: HED1
Reference locus (S288C): YDR014W-A
Gene biotype: protein_coding
Description: Meiosis-specific protein; down-regulates Rad51p-mediated mitotic recombination when the meiotic recombination machinery is impaired; promotes synapsis and required for the normal morphogenesis of synaptonemal complex; prevents the recruitment of Rad54p to site-specific DNA double-strand breaks in vivo; early meiotic gene, transcribed specifically during meiotic prophase
Top 10 interactors (score): RAD51 (0.925); RAD54 (0.883); RDH54 (0.75); DMC1 (0.659); PCH2 (0.611); SPO11 (0.592); MEK1 (0.449)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:463728-464216:+ | gene-YDR014W-A_AKU4011 | rna-NM_001184688.1_AKU4011 | cds-NP_001035220.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:85581-86069:- | gene-YDR014W-A_BG1 | rna-NM_001184688.1_BG1 | cds-NP_001035220.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:491969-492457:+ | gene-YDR014W-A_Bruggeman | rna-NM_001184688.1_Bruggeman | cds-NP_001035220.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:477039-477527:+ | gene-YDR014W-A_CAT1 | rna-NM_001184688.1_CAT1 | cds-NP_001035220.1_CAT1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:460319-460807:+ | gene-YDR014W-A_CBS1585 | rna-NM_001184688.1_CBS1585 | cds-NP_001035220.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:477300-477788:+ | gene-YDR014W-A_CBS436 | rna-NM_001184688.1_CBS436 | cds-NP_001035220.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:457229-457717:+ | gene-YDR014W-A_CBS6412 | rna-NM_001184688.1_CBS6412 | cds-NP_001035220.1_CBS6412 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:479508-479996:+ | gene-YDR014W-A_CBS6413 | rna-NM_001184688.1_CBS6413 | cds-NP_001035220.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:476763-477251:+ | gene-YDR014W-A_CENPK1137D | rna-NM_001184688.1_CENPK1137D | cds-NP_001035220.1_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:471750-472238:+ | gene-YDR014W-A_EthanolRed | rna-NM_001184688.1_EthanolRed | cds-NP_001035220.1_EthanolRed | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:478109-478597:+ | gene-YDR014W-A_FaliES1 | rna-NM_001184688.1_FaliES1 | cds-NP_001035220.1_FaliES1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000042.1:34995-35483:- | gene-YDR014W-A_JAY291 | rna-NM_001184688.1_JAY291 | cds-NP_001035220.1_JAY291 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:477549-478037:+ | gene-YDR014W-A_MUCL30387 | rna-NM_001184688.1_MUCL30387 | cds-NP_001035220.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:468011-468499:+ | gene-YDR014W-A_MUCL30388 | rna-NM_001184688.1_MUCL30388 | cds-NP_001035220.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:461688-462176:+ | gene-YDR014W-A_MUCL39482 | rna-NM_001184688.1_MUCL39482 | cds-NP_001035220.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:383335-383823:+ | gene-YDR014W-A_MUCL42920 | rna-NM_001184688.1_MUCL42920 | cds-NP_001035220.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:477720-478208:+ | gene-YDR014W-A_NCIM3186 | rna-NM_001184688.1_NCIM3186 | cds-NP_001035220.1_NCIM3186 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:461120-461608:+ | gene-YDR014W-A_NCYC1407 | rna-NM_001184688.1_NCYC1407 | cds-NP_001035220.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:476208-476696:+ | gene-YDR014W-A_PE2H3 | rna-NM_001184688.1_PE2H3 | cds-NP_001035220.1_PE2H3 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:475513-476001:+ | gene-YDR014W-A_PE2H4 | rna-NM_001184688.1_PE2H4 | cds-NP_001035220.1_PE2H4 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:477797-478285:+ | gene-YDR014W-A_S288C | rna-NM_001184688.1_S288C | cds-NP_001035220.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000065.1:4971-5459:+ | gene-YDR014W-A_SA1 | rna-NM_001184688.1_SA1 | cds-NP_001035220.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:477588-478076:+ | gene-YDR014W-A_ThermosaccDry | rna-NM_001184688.1_ThermosaccDry | cds-NP_001035220.1_ThermosaccDry | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:482159-482647:+ | gene-YDR014W-A_VR1 | rna-NM_001184688.1_VR1 | cds-NP_001035220.1_VR1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:475483-475971:+ | gene-YDR014W-A_ZTW1 | rna-NM_001184688.1_ZTW1 | cds-NP_001035220.1_ZTW1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:479269-479757:+ | gene-YDR014W-A_Sparadoxus | rna-NM_001184688.1_Sparadoxus | cds-NP_001035220.1_Sparadoxus | 83.9 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |