Gene name: HAP4
Reference locus (S288C): YKL109W
Gene biotype: protein_coding
Description: Transcriptional activator HAP4; Transcription factor; subunit of the heme-activated, glucose-repressed Hap2p/3p/4p/5p CCAAT-binding complex, a transcriptional activator and global regulator of respiratory gene expression; provides the principal activation function of the complex; involved in diauxic shift
Top 10 interactors (score): HAP5 (0.999); HAP2 (0.986); HAP3 (0.962); GCN4 (0.82); MDH1 (0.797); GUT2 (0.792); ROX1 (0.782); LPD1 (0.78); CAT8 (0.765); MIG1 (0.764); ADR1 (0.745); SOK2 (0.712); SIP4 (0.711); MSN4 (0.71); SNF1 (0.691); MSN2 (0.677); ABF1 (0.675); GCR2 (0.674); RAP1 (0.674); YAP6 (0.671)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:218793-220451:+ | gene-YKL109W_AKU4011 | rna-NM_001179675.1_AKU4011 | cds-NP_012813.1_AKU4011 | 99.0 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:195918-197579:+ | gene-YKL109W_BG1 | rna-NM_001179675.1_BG1 | cds-NP_012813.1_BG1 | 99.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:236717-238377:+ | gene-YKL109W_Bruggeman | rna-NM_001179675.1_Bruggeman | cds-NP_012813.1_Bruggeman | 99.5 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:231764-233425:+ | gene-YKL109W_CAT1 | rna-NM_001179675.1_CAT1 | cds-NP_012813.1_CAT1 | 99.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:231022-232680:+ | gene-YKL109W_CBS1585 | rna-NM_001179675.1_CBS1585 | cds-NP_012813.1_CBS1585 | 99.2 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:229612-231273:+ | gene-YKL109W_CBS436 | rna-NM_001179675.1_CBS436 | cds-NP_012813.1_CBS436 | 99.2 | 99.8 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:215654-217312:+ | gene-YKL109W_CBS6412 | rna-NM_001179675.1_CBS6412 | cds-NP_012813.1_CBS6412 | 99.2 | 99.6 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:231489-233147:+ | gene-YKL109W_CBS6413 | rna-NM_001179675.1_CBS6413 | cds-NP_012813.1_CBS6413 | 99.0 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:231869-233533:+ | gene-YKL109W_CENPK1137D | rna-NM_001179675.1_CENPK1137D | cds-NP_012813.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:229473-231128:+ | gene-YKL109W_EthanolRed | rna-NM_001179675.1_EthanolRed | cds-NP_012813.1_EthanolRed | 97.5 | 98.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:230286-231941:+ | gene-YKL109W_FaliES1 | rna-NM_001179675.1_FaliES1 | cds-NP_012813.1_FaliES1 | 97.5 | 98.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000357.1:52633-54294:+ | gene-YKL109W_JAY291 | rna-NM_001179675.1_JAY291 | cds-NP_012813.1_JAY291 | 99.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:238519-240180:+ | gene-YKL109W_MUCL30387 | rna-NM_001179675.1_MUCL30387 | cds-NP_012813.1_MUCL30387 | 99.1 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:232898-234562:+ | gene-YKL109W_MUCL30388 | rna-NM_001179675.1_MUCL30388 | cds-NP_012813.1_MUCL30388 | 99.2 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:230820-232478:+ | gene-YKL109W_MUCL39482 | rna-NM_001179675.1_MUCL39482 | cds-NP_012813.1_MUCL39482 | 99.0 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:235195-236856:+ | gene-YKL109W_MUCL42920 | rna-NM_001179675.1_MUCL42920 | cds-NP_012813.1_MUCL42920 | 99.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:232216-233880:+ | gene-YKL109W_NCIM3186 | rna-NM_001179675.1_NCIM3186 | cds-NP_012813.1_NCIM3186 | 95.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:231010-232671:+ | gene-YKL109W_NCYC1407 | rna-NM_001179675.1_NCYC1407 | cds-NP_012813.1_NCYC1407 | 99.3 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:238105-239766:+ | gene-YKL109W_PE2H3 | rna-NM_001179675.1_PE2H3 | cds-NP_012813.1_PE2H3 | 99.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:234393-236054:+ | gene-YKL109W_PE2H4 | rna-NM_001179675.1_PE2H4 | cds-NP_012813.1_PE2H4 | 99.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:232227-233891:+ | gene-YKL109W_S288C | rna-NM_001179675.1_S288C | cds-NP_012813.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:148353-150014:+ | gene-YKL109W_SA1 | rna-NM_001179675.1_SA1 | cds-NP_012813.1_SA1 | 99.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:230986-232641:+ | gene-YKL109W_ThermosaccDry | rna-NM_001179675.1_ThermosaccDry | cds-NP_012813.1_ThermosaccDry | 97.5 | 98.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:230365-232026:+ | gene-YKL109W_VR1 | rna-NM_001179675.1_VR1 | cds-NP_012813.1_VR1 | 99.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:229554-231215:+ | gene-YKL109W_ZTW1 | rna-NM_001179675.1_ZTW1 | cds-NP_012813.1_ZTW1 | 99.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:246545-248206:+ | gene-YKL109W_Sparadoxus | rna-NM_001179675.1_Sparadoxus | cds-NP_012813.1_Sparadoxus | 87.5 | 98.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |