Gene name: HAL9
Reference locus (S288C): YOL089C
Gene biotype: protein_coding
Description: Halotolerance protein 9; Putative transcription factor containing a zinc finger; overexpression increases salt tolerance through increased expression of the ENA1 (Na+/Li+ extrusion pump) gene while gene disruption decreases both salt tolerance and ENA1 expression; HAL9 has a paralog, TBS1, that arose from the whole genome duplication
Top 10 interactors (score): FLR1 (0.792); YJL206C (0.705); YMR310C (0.693); YDR131C (0.692); CTR1 (0.65); YAP1 (0.649); TPO1 (0.627); RSB1 (0.623); BUD17 (0.612); HEL1 (0.61); YFL040W (0.572); URC2 (0.57); YER135C (0.567); CIN10 (0.526); YFH7 (0.522); MED4 (0.499); PHM7 (0.497); ERG11 (0.49); ENA1 (0.489); GTO3 (0.489)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:133745-136837:- | gene-YOL089C_AKU4011 | rna-NM_001183343.1_AKU4011 | cds-NP_014552.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000172.1:98850-101942:- | gene-YOL089C_BG1 | rna-NM_001183343.1_BG1 | cds-NP_014552.1_BG1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:135294-138386:- | gene-YOL089C_Bruggeman | rna-NM_001183343.1_Bruggeman | cds-NP_014552.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:134625-137717:- | gene-YOL089C_CAT1 | rna-NM_001183343.1_CAT1 | cds-NP_014552.1_CAT1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:128157-131249:- | gene-YOL089C_CBS1585 | rna-NM_001183343.1_CBS1585 | cds-NP_014552.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:133431-136523:- | gene-YOL089C_CBS436 | rna-NM_001183343.1_CBS436 | cds-NP_014552.1_CBS436 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:128313-131405:- | gene-YOL089C_CBS6412 | rna-NM_001183343.1_CBS6412 | cds-NP_014552.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:135020-138112:- | gene-YOL089C_CBS6413 | rna-NM_001183343.1_CBS6413 | cds-NP_014552.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:144363-147455:- | gene-YOL089C_CENPK1137D | rna-NM_001183343.1_CENPK1137D | cds-NP_014552.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:131318-134410:- | gene-YOL089C_EthanolRed | rna-NM_001183343.1_EthanolRed | cds-NP_014552.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:133645-136737:- | gene-YOL089C_FaliES1 | rna-NM_001183343.1_FaliES1 | cds-NP_014552.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000160.1:6737-9829:+ | gene-YOL089C_JAY291 | rna-NM_001183343.1_JAY291 | cds-NP_014552.1_JAY291 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:139497-142589:- | gene-YOL089C_MUCL30387 | rna-NM_001183343.1_MUCL30387 | cds-NP_014552.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:142677-145769:- | gene-YOL089C_MUCL30388 | rna-NM_001183343.1_MUCL30388 | cds-NP_014552.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:136078-139170:- | gene-YOL089C_MUCL39482 | rna-NM_001183343.1_MUCL39482 | cds-NP_014552.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:151846-154938:- | gene-YOL089C_MUCL42920 | rna-NM_001183343.1_MUCL42920 | cds-NP_014552.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:150287-153379:- | gene-YOL089C_NCIM3186 | rna-NM_001183343.1_NCIM3186 | cds-NP_014552.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:142673-145765:- | gene-YOL089C_NCYC1407 | rna-NM_001183343.1_NCYC1407 | cds-NP_014552.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:125968-129060:- | gene-YOL089C_PE2H3 | rna-NM_001183343.1_PE2H3 | cds-NP_014552.1_PE2H3 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:136952-140044:- | gene-YOL089C_PE2H4 | rna-NM_001183343.1_PE2H4 | cds-NP_014552.1_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:150398-153490:- | gene-YOL089C_S288C | rna-NM_001183343.1_S288C | cds-NP_014552.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:118278-121370:- | gene-YOL089C_SA1 | rna-NM_001183343.1_SA1 | cds-NP_014552.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:132653-135745:- | gene-YOL089C_ThermosaccDry | rna-NM_001183343.1_ThermosaccDry | cds-NP_014552.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:133219-136311:- | gene-YOL089C_VR1 | rna-NM_001183343.1_VR1 | cds-NP_014552.1_VR1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000031.1:132351-135443:- | gene-YOL089C_ZTW1 | rna-NM_001183343.1_ZTW1 | cds-NP_014552.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:135815-138904:- | gene-YOL089C_Sparadoxus | rna-NM_001183343.1_Sparadoxus | cds-NP_014552.1_Sparadoxus | 88.4 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |