Gene name: HAL1
Reference locus (S288C): YPR005C
Gene biotype: protein_coding
Description: Cytoplasmic protein involved in halotolerance; decreases intracellular Na+ (via Ena1p) and increases intracellular K+ by decreasing efflux; expression repressed by Ssn6p-Tup1p and Sko1p and induced by NaCl, KCl, and sorbitol through Gcn4p
Top 10 interactors (score): ENA1 (0.836); SIS2 (0.812); TRK1 (0.774); TOK1 (0.772); PPZ1 (0.757); SAT4 (0.69); HAL5 (0.658); DOG1 (0.62); NHA1 (0.571); PIN2 (0.569); INO1 (0.526); AQY1 (0.481); CHS5 (0.47); PPZ2 (0.455); FMP45 (0.453); PRP4 (0.451); MET22 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:537409-538293:- | gene-YPR005C_AKU4011 | rna-NM_001184102.1_AKU4011 | cds-NP_015330.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:358892-359776:+ | gene-YPR005C_BG1 | rna-NM_001184102.1_BG1 | cds-NP_015330.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:614424-615308:- | gene-YPR005C_Bruggeman | rna-NM_001184102.1_Bruggeman | cds-NP_015330.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:657530-658414:- | gene-YPR005C_CAT1 | rna-NM_001184102.1_CAT1 | cds-NP_015330.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:541096-541980:- | gene-YPR005C_CBS1585 | rna-NM_001184102.1_CBS1585 | cds-NP_015330.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:555510-556394:- | gene-YPR005C_CBS436 | rna-NM_001184102.1_CBS436 | cds-NP_015330.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:544845-545729:- | gene-YPR005C_CBS6412 | rna-NM_001184102.1_CBS6412 | cds-NP_015330.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:537556-538440:- | gene-YPR005C_CBS6413 | rna-NM_001184102.1_CBS6413 | cds-NP_015330.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:565762-566646:- | gene-YPR005C_CENPK1137D | rna-NM_001184102.1_CENPK1137D | cds-NP_015330.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:535343-536227:- | gene-YPR005C_EthanolRed | rna-NM_001184102.1_EthanolRed | cds-NP_015330.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:543173-544057:- | gene-YPR005C_FaliES1 | rna-NM_001184102.1_FaliES1 | cds-NP_015330.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000337.1:5005-5889:- | gene-YPR005C_JAY291 | rna-NM_001184102.1_JAY291 | cds-NP_015330.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:555635-556519:- | gene-YPR005C_MUCL30387 | rna-NM_001184102.1_MUCL30387 | cds-NP_015330.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:554736-555620:- | gene-YPR005C_MUCL30388 | rna-NM_001184102.1_MUCL30388 | cds-NP_015330.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:534336-535220:- | gene-YPR005C_MUCL39482 | rna-NM_001184102.1_MUCL39482 | cds-NP_015330.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:594518-595402:- | gene-YPR005C_MUCL42920 | rna-NM_001184102.1_MUCL42920 | cds-NP_015330.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:565770-566654:- | gene-YPR005C_NCIM3186 | rna-NM_001184102.1_NCIM3186 | cds-NP_015330.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:542035-542919:- | gene-YPR005C_NCYC1407 | rna-NM_001184102.1_NCYC1407 | cds-NP_015330.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:548965-549849:- | gene-YPR005C_PE2H3 | rna-NM_001184102.1_PE2H3 | cds-NP_015330.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:548580-549464:- | gene-YPR005C_PE2H4 | rna-NM_001184102.1_PE2H4 | cds-NP_015330.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:565787-566671:- | gene-YPR005C_S288C | rna-NM_001184102.1_S288C | cds-NP_015330.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000026.1:133619-134503:+ | gene-YPR005C_SA1 | rna-NM_001184102.1_SA1 | cds-NP_015330.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:542972-543856:- | gene-YPR005C_ThermosaccDry | rna-NM_001184102.1_ThermosaccDry | cds-NP_015330.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:559219-560103:- | gene-YPR005C_VR1 | rna-NM_001184102.1_VR1 | cds-NP_015330.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:542277-543161:- | gene-YPR005C_ZTW1 | rna-NM_001184102.1_ZTW1 | cds-NP_015330.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:541907-542790:- | gene-YPR005C_Sparadoxus | rna-NM_001184102.1_Sparadoxus | cds-NP_015330.1_Sparadoxus | 84.6 | 99.8 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |