Gene name: HAA1
Reference locus (S288C): YPR008W
Gene biotype: protein_coding
Description: Transcriptional activator involved in adaptation to weak acid stress; activates transcription of TPO2, YRO2, and other genes encoding membrane stress proteins; HAA1 has a paralog, CUP2, that arose from the whole genome duplication; relocalizes from cytoplasm to nucleus upon DNA replication stress
Top 10 interactors (score): TPO2 (0.953); TPO3 (0.942); CTR3 (0.91); CTR2 (0.907); WAR1 (0.846); HRK1 (0.843); PDR12 (0.824); YRO2 (0.812); YGP1 (0.78); AQR1 (0.765); TDA6 (0.76); MSN4 (0.749); FPS1 (0.745); SPI1 (0.745); MSN5 (0.721); MSN2 (0.716); COM2 (0.7); RIM101 (0.694); SAP30 (0.674); CCC2 (0.635)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:544621-546705:+ | gene-YPR008W_AKU4011 | rna-NM_001184105.1_AKU4011 | cds-NP_015333.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:350385-352469:- | gene-YPR008W_BG1 | rna-NM_001184105.1_BG1 | cds-NP_015333.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:621655-623739:+ | gene-YPR008W_Bruggeman | rna-NM_001184105.1_Bruggeman | cds-NP_015333.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:664986-667070:+ | gene-YPR008W_CAT1 | rna-NM_001184105.1_CAT1 | cds-NP_015333.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:548308-550392:+ | gene-YPR008W_CBS1585 | rna-NM_001184105.1_CBS1585 | cds-NP_015333.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:562741-564825:+ | gene-YPR008W_CBS436 | rna-NM_001184105.1_CBS436 | cds-NP_015333.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:552057-554141:+ | gene-YPR008W_CBS6412 | rna-NM_001184105.1_CBS6412 | cds-NP_015333.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:544768-546852:+ | gene-YPR008W_CBS6413 | rna-NM_001184105.1_CBS6413 | cds-NP_015333.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:572993-575077:+ | gene-YPR008W_CENPK1137D | rna-NM_001184105.1_CENPK1137D | cds-NP_015333.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:542554-544638:+ | gene-YPR008W_EthanolRed | rna-NM_001184105.1_EthanolRed | cds-NP_015333.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:550385-552469:+ | gene-YPR008W_FaliES1 | rna-NM_001184105.1_FaliES1 | cds-NP_015333.1_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000337.1:12236-14320:+ | gene-YPR008W_JAY291 | rna-NM_001184105.1_JAY291 | cds-NP_015333.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:562866-564950:+ | gene-YPR008W_MUCL30387 | rna-NM_001184105.1_MUCL30387 | cds-NP_015333.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:561967-564051:+ | gene-YPR008W_MUCL30388 | rna-NM_001184105.1_MUCL30388 | cds-NP_015333.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:541548-543632:+ | gene-YPR008W_MUCL39482 | rna-NM_001184105.1_MUCL39482 | cds-NP_015333.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:601998-604082:+ | gene-YPR008W_MUCL42920 | rna-NM_001184105.1_MUCL42920 | cds-NP_015333.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:573001-575085:+ | gene-YPR008W_NCIM3186 | rna-NM_001184105.1_NCIM3186 | cds-NP_015333.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:549247-551331:+ | gene-YPR008W_NCYC1407 | rna-NM_001184105.1_NCYC1407 | cds-NP_015333.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:556272-558356:+ | gene-YPR008W_PE2H3 | rna-NM_001184105.1_PE2H3 | cds-NP_015333.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:555887-557971:+ | gene-YPR008W_PE2H4 | rna-NM_001184105.1_PE2H4 | cds-NP_015333.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:573018-575102:+ | gene-YPR008W_S288C | rna-NM_001184105.1_S288C | cds-NP_015333.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000026.1:125188-127272:- | gene-YPR008W_SA1 | rna-NM_001184105.1_SA1 | cds-NP_015333.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:550184-552268:+ | gene-YPR008W_ThermosaccDry | rna-NM_001184105.1_ThermosaccDry | cds-NP_015333.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:566450-568534:+ | gene-YPR008W_VR1 | rna-NM_001184105.1_VR1 | cds-NP_015333.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:549487-551571:+ | gene-YPR008W_ZTW1 | rna-NM_001184105.1_ZTW1 | cds-NP_015333.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:549615-551723:+ | gene-YPR008W_Sparadoxus | rna-NM_001184105.1_Sparadoxus | cds-NP_015333.1_Sparadoxus | 90.6 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |