Gene name: GZF3
Reference locus (S288C): YJL110C
Gene biotype: protein_coding
Description: Gata-binding protein, other eukaryote; GATA zinc finger protein; negatively regulates nitrogen catabolic gene expression by competing with Gat1p for GATA site binding; function requires a repressive carbon source; dimerizes with Dal80p and binds to Tor1p; GZF3 has a paralog, DAL80, that arose from the whole genome duplication
Top 10 interactors (score): URE2 (0.813); MCM1 (0.763); GCN4 (0.746); GCN5 (0.739); HDA1 (0.726); GAP1 (0.715); MEP2 (0.715); UGA4 (0.699); DAL81 (0.694); MEP1 (0.677); HCM1 (0.667); SPT15 (0.662); HHT2 (0.66); HMT1 (0.649); AZF1 (0.637); MET31 (0.636); GLN3 (0.623); ESA1 (0.621); HTZ1 (0.606); HTA1 (0.605)
Homologues (species, bitscore): GATA6 (Homo sapiens, 75.5); Gata5 (Mus musculus, 75.5); gata5 (Danio rerio, 76.6); gata4 (Xenopus tropicalis, 76.3); srp (Drosophila melanogaster, 72.8); elt-1 (Caenorhabditis elegans, 72.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:192654-194309:- | gene-YJL110C_AKU4011 | rna-NM_001181543.1_AKU4011 | cds-NP_012425.1_AKU4011 | 98.7 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:420133-421788:+ | gene-YJL110C_BG1 | rna-NM_001181543.1_BG1 | cds-NP_012425.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:204090-205745:- | gene-YJL110C_Bruggeman | rna-NM_001181543.1_Bruggeman | cds-NP_012425.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:209000-210655:- | gene-YJL110C_CAT1 | rna-NM_001181543.1_CAT1 | cds-NP_012425.1_CAT1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:204315-205970:- | gene-YJL110C_CBS1585 | rna-NM_001181543.1_CBS1585 | cds-NP_012425.1_CBS1585 | 98.7 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:222415-224070:- | gene-YJL110C_CBS436 | rna-NM_001181543.1_CBS436 | cds-NP_012425.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:193412-195067:- | gene-YJL110C_CBS6412 | rna-NM_001181543.1_CBS6412 | cds-NP_012425.1_CBS6412 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:194767-196422:- | gene-YJL110C_CBS6413 | rna-NM_001181543.1_CBS6413 | cds-NP_012425.1_CBS6413 | 98.7 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:192372-194027:- | gene-YJL110C_CENPK1137D | rna-NM_001181543.1_CENPK1137D | cds-NP_012425.1_CENPK1137D | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:196504-198159:- | gene-YJL110C_EthanolRed | rna-NM_001181543.1_EthanolRed | cds-NP_012425.1_EthanolRed | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:208080-209735:- | gene-YJL110C_FaliES1 | rna-NM_001181543.1_FaliES1 | cds-NP_012425.1_FaliES1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000138.1:5708-7363:- | gene-YJL110C_JAY291 | rna-NM_001181543.1_JAY291 | cds-NP_012425.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:206357-208012:- | gene-YJL110C_MUCL30387 | rna-NM_001181543.1_MUCL30387 | cds-NP_012425.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:202436-204091:- | gene-YJL110C_MUCL30388 | rna-NM_001181543.1_MUCL30388 | cds-NP_012425.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:197072-198727:- | gene-YJL110C_MUCL39482 | rna-NM_001181543.1_MUCL39482 | cds-NP_012425.1_MUCL39482 | 98.7 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:203256-204911:- | gene-YJL110C_MUCL42920 | rna-NM_001181543.1_MUCL42920 | cds-NP_012425.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:209901-211556:- | gene-YJL110C_NCIM3186 | rna-NM_001181543.1_NCIM3186 | cds-NP_012425.1_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:195762-197417:- | gene-YJL110C_NCYC1407 | rna-NM_001181543.1_NCYC1407 | cds-NP_012425.1_NCYC1407 | 98.7 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:208132-209787:- | gene-YJL110C_PE2H3 | rna-NM_001181543.1_PE2H3 | cds-NP_012425.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:207776-209431:- | gene-YJL110C_PE2H4 | rna-NM_001181543.1_PE2H4 | cds-NP_012425.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:209922-211577:- | gene-YJL110C_S288C | rna-NM_001181543.1_S288C | cds-NP_012425.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:5639-7294:- | gene-YJL110C_SA1 | rna-NM_001181543.1_SA1 | cds-NP_012425.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:201490-203145:- | gene-YJL110C_ThermosaccDry | rna-NM_001181543.1_ThermosaccDry | cds-NP_012425.1_ThermosaccDry | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:201911-203566:- | gene-YJL110C_VR1 | rna-NM_001181543.1_VR1 | cds-NP_012425.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:182855-184510:- | gene-YJL110C_ZTW1 | rna-NM_001181543.1_ZTW1 | cds-NP_012425.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:206919-208571:- | gene-YJL110C_Sparadoxus | rna-NM_001181543.1_Sparadoxus | cds-NP_012425.1_Sparadoxus | 85.5 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |