Gene name: GTS1
Reference locus (S288C): YGL181W
Gene biotype: protein_coding
Description: Protein involved in Arf3p regulation and in transcription regulation; localizes to the nucleus and to endocytic patches; contains an N-terminal Zn-finger and ArfGAP homology domain, a C-terminal glutamine-rich region, and a UBA (ubiquitin associated) domain; gts1 mutations affect budding, cell size, heat tolerance, sporulation, life span, ultradian rhythms, endocytosis; expression oscillates in a pattern similar to metabolic oscillations
Top 10 interactors (score): CEF1 (0.999); ARF3 (0.969); PRP22 (0.921); YSC84 (0.874); ARL1 (0.872); PAN1 (0.87); SLA1 (0.849); LSB3 (0.816); POG1 (0.77); LSB5 (0.767); YEL1 (0.766); GEA2 (0.758); INP52 (0.755); YAP1802 (0.718); FLO1 (0.71); YAP1801 (0.707); RVS167 (0.705); GEA1 (0.699); CLC1 (0.679); BSP1 (0.674)
Homologues (species, bitscore): SMAP2 (Homo sapiens, 74.7); Smap2 (Mus musculus, 75.1); smap1 (Danio rerio, 75.1); smap1 (Xenopus tropicalis, 71.2); CG8243 (Drosophila melanogaster, 68.2); W09D10.1 (Caenorhabditis elegans, 68.6); AGD5 (Arabidopsis thaliana, 71.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:160422-161642:+ | gene-YGL181W_AKU4011 | rna-NM_001181046.1_AKU4011 | cds-NP_011334.1_AKU4011 | 95.1 | 98.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:248795-249979:- | gene-YGL181W_BG1 | rna-NM_001181046.1_BG1 | cds-NP_011334.1_BG1 | 99.1 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:162664-163872:+ | gene-YGL181W_Bruggeman | rna-NM_001181046.1_Bruggeman | cds-NP_011334.1_Bruggeman | 97.2 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:158539-159729:+ | gene-YGL181W_CAT1 | rna-NM_001181046.1_CAT1 | cds-NP_011334.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:163567-164787:+ | gene-YGL181W_CBS1585 | rna-NM_001181046.1_CBS1585 | cds-NP_011334.1_CBS1585 | 95.0 | 98.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:158545-159759:+ | gene-YGL181W_CBS436 | rna-NM_001181046.1_CBS436 | cds-NP_011334.1_CBS436 | 97.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:150347-151567:+ | gene-YGL181W_CBS6412 | rna-NM_001181046.1_CBS6412 | cds-NP_011334.1_CBS6412 | 94.8 | 98.9 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:157876-159096:+ | gene-YGL181W_CBS6413 | rna-NM_001181046.1_CBS6413 | cds-NP_011334.1_CBS6413 | 95.1 | 98.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:158097-159287:+ | gene-YGL181W_CENPK1137D | rna-NM_001181046.1_CENPK1137D | cds-NP_011334.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:150216-151460:+ | gene-YGL181W_EthanolRed | rna-NM_001181046.1_EthanolRed | cds-NP_011334.1_EthanolRed | 94.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:151463-152707:+ | gene-YGL181W_FaliES1 | rna-NM_001181046.1_FaliES1 | cds-NP_011334.1_FaliES1 | 94.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000090.1:1771-2955:+ | gene-YGL181W_JAY291 | rna-NM_001181046.1_JAY291 | cds-NP_011334.1_JAY291 | 99.1 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:159898-161106:+ | gene-YGL181W_MUCL30387 | rna-NM_001181046.1_MUCL30387 | cds-NP_011334.1_MUCL30387 | 97.2 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:162999-164207:+ | gene-YGL181W_MUCL30388 | rna-NM_001181046.1_MUCL30388 | cds-NP_011334.1_MUCL30388 | 97.2 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:160571-161791:+ | gene-YGL181W_MUCL39482 | rna-NM_001181046.1_MUCL39482 | cds-NP_011334.1_MUCL39482 | 95.1 | 98.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:163205-164413:+ | gene-YGL181W_MUCL42920 | rna-NM_001181046.1_MUCL42920 | cds-NP_011334.1_MUCL42920 | 97.2 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:157906-159096:+ | gene-YGL181W_NCIM3186 | rna-NM_001181046.1_NCIM3186 | cds-NP_011334.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:152058-153278:+ | gene-YGL181W_NCYC1407 | rna-NM_001181046.1_NCYC1407 | cds-NP_011334.1_NCYC1407 | 94.8 | 98.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:154063-155253:+ | gene-YGL181W_PE2H3 | rna-NM_001181046.1_PE2H3 | cds-NP_011334.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:153611-154801:+ | gene-YGL181W_PE2H4 | rna-NM_001181046.1_PE2H4 | cds-NP_011334.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:157906-159096:+ | gene-YGL181W_S288C | rna-NM_001181046.1_S288C | cds-NP_011334.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000067.1:17664-18854:+ | gene-YGL181W_SA1 | rna-NM_001181046.1_SA1 | cds-NP_011334.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:151693-152937:+ | gene-YGL181W_ThermosaccDry | rna-NM_001181046.1_ThermosaccDry | cds-NP_011334.1_ThermosaccDry | 94.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:158965-160155:+ | gene-YGL181W_VR1 | rna-NM_001181046.1_VR1 | cds-NP_011334.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:150213-151373:+ | gene-YGL181W_ZTW1 | rna-NM_001181046.1_ZTW1 | cds-NP_011334.1_ZTW1 | 96.8 | 97.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:157043-158248:+ | gene-YGL181W_Sparadoxus | rna-NM_001181046.1_Sparadoxus | cds-NP_011334.1_Sparadoxus | 88.9 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |