Gene name: GTF1
Reference locus (S288C): YGR102C
Gene biotype: protein_coding
Description: Glutamyl-tRNA(Gln) amidotransferase subunit F, mitochondrial; Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex; involved in the formation of Q-tRNAQ; transposon insertion mutant is salt sensitive and null mutant has growth defects; non-tagged protein is detected in purified mitochondria
Top 10 interactors (score): HER2 (0.998); PET112 (0.997); GLN4 (0.921); RRG8 (0.84); YDR114C (0.813); YNL184C (0.766); FAP1 (0.765); CCM1 (0.716); RRG1 (0.711); SLM5 (0.658); ATP8 (0.619); MHR1 (0.615); MGM101 (0.607); FUN12 (0.598); RRG7 (0.573); MSH1 (0.572); GEP5 (0.561); RRG9 (0.522); COX2 (0.514); SRF1 (0.499)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:678766-679317:- | gene-YGR102C_AKU4011 | rna-NM_001181231.3_AKU4011 | cds-NP_011616.3_AKU4011 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000173.1:114625-115176:- | gene-YGR102C_BG1 | rna-NM_001181231.3_BG1 | cds-NP_011616.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:680956-681507:- | gene-YGR102C_Bruggeman | rna-NM_001181231.3_Bruggeman | cds-NP_011616.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:679145-679696:- | gene-YGR102C_CAT1 | rna-NM_001181231.3_CAT1 | cds-NP_011616.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:679729-680280:- | gene-YGR102C_CBS1585 | rna-NM_001181231.3_CBS1585 | cds-NP_011616.3_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:681387-681938:- | gene-YGR102C_CBS436 | rna-NM_001181231.3_CBS436 | cds-NP_011616.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:671433-671984:- | gene-YGR102C_CBS6412 | rna-NM_001181231.3_CBS6412 | cds-NP_011616.3_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:676366-676917:- | gene-YGR102C_CBS6413 | rna-NM_001181231.3_CBS6413 | cds-NP_011616.3_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:694259-694810:- | gene-YGR102C_CENPK1137D | rna-NM_001181231.3_CENPK1137D | cds-NP_011616.3_CENPK1137D | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:666356-666907:- | gene-YGR102C_EthanolRed | rna-NM_001181231.3_EthanolRed | cds-NP_011616.3_EthanolRed | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:670164-670715:- | gene-YGR102C_FaliES1 | rna-NM_001181231.3_FaliES1 | cds-NP_011616.3_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000396.1:5840-6391:+ | gene-YGR102C_JAY291 | rna-NM_001181231.3_JAY291 | cds-NP_011616.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:677945-678496:- | gene-YGR102C_MUCL30387 | rna-NM_001181231.3_MUCL30387 | cds-NP_011616.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:680756-681307:- | gene-YGR102C_MUCL30388 | rna-NM_001181231.3_MUCL30388 | cds-NP_011616.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:675460-676011:- | gene-YGR102C_MUCL39482 | rna-NM_001181231.3_MUCL39482 | cds-NP_011616.3_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:685768-686319:- | gene-YGR102C_MUCL42920 | rna-NM_001181231.3_MUCL42920 | cds-NP_011616.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:694584-695135:- | gene-YGR102C_NCIM3186 | rna-NM_001181231.3_NCIM3186 | cds-NP_011616.3_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:670149-670700:- | gene-YGR102C_NCYC1407 | rna-NM_001181231.3_NCYC1407 | cds-NP_011616.3_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:672835-673386:- | gene-YGR102C_PE2H3 | rna-NM_001181231.3_PE2H3 | cds-NP_011616.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:677954-678505:- | gene-YGR102C_PE2H4 | rna-NM_001181231.3_PE2H4 | cds-NP_011616.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:694584-695135:- | gene-YGR102C_S288C | rna-NM_001181231.3_S288C | cds-NP_011616.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000015.1:121193-121744:- | gene-YGR102C_SA1 | rna-NM_001181231.3_SA1 | cds-NP_011616.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:690533-691084:- | gene-YGR102C_ThermosaccDry | rna-NM_001181231.3_ThermosaccDry | cds-NP_011616.3_ThermosaccDry | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:787023-787574:- | gene-YGR102C_VR1 | rna-NM_001181231.3_VR1 | cds-NP_011616.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000015.1:144781-145332:- | gene-YGR102C_ZTW1 | rna-NM_001181231.3_ZTW1 | cds-NP_011616.3_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:680549-681100:- | gene-YGR102C_Sparadoxus | rna-NM_001181231.3_Sparadoxus | cds-NP_011616.3_Sparadoxus | 85.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |