Gene name: GTA1
Reference locus (S288C): YEL043W
Gene biotype: protein_coding
Description: Uncharacterized protein YEL043W; Predicted cytoskeleton protein involved in intracellular signaling; based on quantitative analysis of protein-protein interaction maps; may interact with ribosomes, based on co-purification studies; contains fibronectin type III domain fold
Top 10 interactors (score): NNF2 (0.971); YFR035C (0.763); GMH1 (0.746); YDR455C (0.673); YLR177W (0.619); SYH1 (0.619); VAB2 (0.611); BEM1 (0.588); THP3 (0.571); SFT2 (0.571); AQY3 (0.495); TAO3 (0.493); VAC8 (0.486); COG6 (0.483); BOI2 (0.477); NUF2 (0.469); MRP8 (0.465); VAC17 (0.453); VPS8 (0.44); VPS21 (0.416)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:64542-67412:+ | gene-YEL043W_AKU4011 | rna-NM_001178858.3_AKU4011 | cds-NP_010871.3_AKU4011 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000075.1:13137-16007:- | gene-YEL043W_BG1 | rna-NM_001178858.3_BG1 | cds-NP_010871.3_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:68684-71554:+ | gene-YEL043W_Bruggeman | rna-NM_001178858.3_Bruggeman | cds-NP_010871.3_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:66472-69342:+ | gene-YEL043W_CAT1 | rna-NM_001178858.3_CAT1 | cds-NP_010871.3_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:64488-67358:+ | gene-YEL043W_CBS1585 | rna-NM_001178858.3_CBS1585 | cds-NP_010871.3_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:66115-68985:+ | gene-YEL043W_CBS436 | rna-NM_001178858.3_CBS436 | cds-NP_010871.3_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:64740-67610:+ | gene-YEL043W_CBS6412 | rna-NM_001178858.3_CBS6412 | cds-NP_010871.3_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:69380-72250:+ | gene-YEL043W_CBS6413 | rna-NM_001178858.3_CBS6413 | cds-NP_010871.3_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:68335-71203:+ | gene-YEL043W_CENPK1137D | rna-NM_001178858.3_CENPK1137D | cds-NP_010871.3_CENPK1137D | 98.8 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:64295-67165:+ | gene-YEL043W_EthanolRed | rna-NM_001178858.3_EthanolRed | cds-NP_010871.3_EthanolRed | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:64558-67428:+ | gene-YEL043W_FaliES1 | rna-NM_001178858.3_FaliES1 | cds-NP_010871.3_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000022.1:12388-15258:- | gene-YEL043W_JAY291 | rna-NM_001178858.3_JAY291 | cds-NP_010871.3_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:68740-71610:+ | gene-YEL043W_MUCL30387 | rna-NM_001178858.3_MUCL30387 | cds-NP_010871.3_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:64599-67469:+ | gene-YEL043W_MUCL30388 | rna-NM_001178858.3_MUCL30388 | cds-NP_010871.3_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:63857-66727:+ | gene-YEL043W_MUCL39482 | rna-NM_001178858.3_MUCL39482 | cds-NP_010871.3_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:68490-71360:+ | gene-YEL043W_MUCL42920 | rna-NM_001178858.3_MUCL42920 | cds-NP_010871.3_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:70477-73347:+ | gene-YEL043W_NCIM3186 | rna-NM_001178858.3_NCIM3186 | cds-NP_010871.3_NCIM3186 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:68951-71821:+ | gene-YEL043W_NCYC1407 | rna-NM_001178858.3_NCYC1407 | cds-NP_010871.3_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:72975-75845:+ | gene-YEL043W_PE2H3 | rna-NM_001178858.3_PE2H3 | cds-NP_010871.3_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:68890-71760:+ | gene-YEL043W_PE2H4 | rna-NM_001178858.3_PE2H4 | cds-NP_010871.3_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:70478-73348:+ | gene-YEL043W_S288C | rna-NM_001178858.3_S288C | cds-NP_010871.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000053.1:13222-16104:- | gene-YEL043W_SA1 | rna-NM_001178858.3_SA1 | cds-NP_010871.3_SA1 | 98.5 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:64957-67827:+ | gene-YEL043W_ThermosaccDry | rna-NM_001178858.3_ThermosaccDry | cds-NP_010871.3_ThermosaccDry | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:64178-67048:+ | gene-YEL043W_VR1 | rna-NM_001178858.3_VR1 | cds-NP_010871.3_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:63890-66760:+ | gene-YEL043W_ZTW1 | rna-NM_001178858.3_ZTW1 | cds-NP_010871.3_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:66553-69420:+ | gene-YEL043W_Sparadoxus | rna-NM_001178858.3_Sparadoxus | cds-NP_010871.3_Sparadoxus | 88.7 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |