Gene name: GSY2
Reference locus (S288C): YLR258W
Gene biotype: protein_coding
Description: Glycogen [starch] synthase isoform 2; Glycogen synthase; expression induced by glucose limitation, nitrogen starvation, heat shock, and stationary phase; activity regulated by cAMP-dependent, Snf1p and Pho85p kinases as well as by the Gac1p-Glc7p phosphatase; GSY2 has a paralog, GSY1, that arose from the whole genome duplication; relocalizes from cytoplasm to plasma membrane upon DNA replication stress; Belongs to the glycosyltransferase 3 family
Top 10 interactors (score): GLG2 (0.999); GLG1 (0.999); GPH1 (0.999); GLC3 (0.999); GSY1 (0.999); UGP1 (0.997); PGM2 (0.994); TPS2 (0.993); TSL1 (0.992); GDB1 (0.991); TPS1 (0.99); GLC7 (0.988); GIP2 (0.986); GAC1 (0.985); PIG2 (0.975); YHL012W (0.973); GLK1 (0.97); HXK1 (0.969); SOL4 (0.958); PIC2 (0.957)
Homologues (species, bitscore): GYS1 (Homo sapiens, 732.3); Gys1 (Mus musculus, 732.3); gys2 (Danio rerio, 702.6); gys1 (Xenopus tropicalis, 721.5); GlyS (Drosophila melanogaster, 681.0); gsy-1 (Caenorhabditis elegans, 660.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:609004-611121:+ | gene-YLR258W_AKU4011 | rna-NM_001182145.1_AKU4011 | cds-NP_013359.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000170.1:120769-122886:- | gene-YLR258W_BG1 | rna-NM_001182145.1_BG1 | cds-NP_013359.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:643250-645367:+ | gene-YLR258W_Bruggeman | rna-NM_001182145.1_Bruggeman | cds-NP_013359.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:642395-644512:+ | gene-YLR258W_CAT1 | rna-NM_001182145.1_CAT1 | cds-NP_013359.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:644499-646616:+ | gene-YLR258W_CBS1585 | rna-NM_001182145.1_CBS1585 | cds-NP_013359.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:628724-630841:+ | gene-YLR258W_CBS436 | rna-NM_001182145.1_CBS436 | cds-NP_013359.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:607474-609591:+ | gene-YLR258W_CBS6412 | rna-NM_001182145.1_CBS6412 | cds-NP_013359.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:644795-646912:+ | gene-YLR258W_CBS6413 | rna-NM_001182145.1_CBS6413 | cds-NP_013359.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:645325-647442:+ | gene-YLR258W_CENPK1137D | rna-NM_001182145.1_CENPK1137D | cds-NP_013359.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:603106-605223:+ | gene-YLR258W_EthanolRed | rna-NM_001182145.1_EthanolRed | cds-NP_013359.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:631943-634060:+ | gene-YLR258W_FaliES1 | rna-NM_001182145.1_FaliES1 | cds-NP_013359.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000136.1:25293-27410:- | gene-YLR258W_JAY291 | rna-NM_001182145.1_JAY291 | cds-NP_013359.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:644110-646227:+ | gene-YLR258W_MUCL30387 | rna-NM_001182145.1_MUCL30387 | cds-NP_013359.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:648873-650990:+ | gene-YLR258W_MUCL30388 | rna-NM_001182145.1_MUCL30388 | cds-NP_013359.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:645480-647597:+ | gene-YLR258W_MUCL39482 | rna-NM_001182145.1_MUCL39482 | cds-NP_013359.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:640252-642369:+ | gene-YLR258W_MUCL42920 | rna-NM_001182145.1_MUCL42920 | cds-NP_013359.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:660690-662807:+ | gene-YLR258W_NCIM3186 | rna-NM_001182145.1_NCIM3186 | cds-NP_013359.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:632467-634584:+ | gene-YLR258W_NCYC1407 | rna-NM_001182145.1_NCYC1407 | cds-NP_013359.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:636201-638318:+ | gene-YLR258W_PE2H3 | rna-NM_001182145.1_PE2H3 | cds-NP_013359.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:635945-638062:+ | gene-YLR258W_PE2H4 | rna-NM_001182145.1_PE2H4 | cds-NP_013359.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:660716-662833:+ | gene-YLR258W_S288C | rna-NM_001182145.1_S288C | cds-NP_013359.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000013.1:25539-27656:- | gene-YLR258W_SA1 | rna-NM_001182145.1_SA1 | cds-NP_013359.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:633951-636068:+ | gene-YLR258W_ThermosaccDry | rna-NM_001182145.1_ThermosaccDry | cds-NP_013359.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:645315-647432:+ | gene-YLR258W_VR1 | rna-NM_001182145.1_VR1 | cds-NP_013359.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000024.1:158263-160380:+ | gene-YLR258W_ZTW1 | rna-NM_001182145.1_ZTW1 | cds-NP_013359.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:619804-621921:+ | gene-YLR258W_Sparadoxus | rna-NM_001182145.1_Sparadoxus | cds-NP_013359.1_Sparadoxus | 92.2 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |