Gene name: GSY1
Reference locus (S288C): YFR015C
Gene biotype: protein_coding
Description: Glycogen [starch] synthase isoform 1; Glycogen synthase; expression induced by glucose limitation, nitrogen starvation, environmental stress, and entry into stationary phase; GSY1 has a paralog, GSY2, that arose from the whole genome duplication; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress
Top 10 interactors (score): GLC3 (0.999); GLG1 (0.999); GSY2 (0.999); GLG2 (0.998); GPH1 (0.996); TPS2 (0.991); UGP1 (0.987); PGM2 (0.982); TPS1 (0.981); TSL1 (0.978); RGI1 (0.978); HXK1 (0.968); YHL012W (0.964); EMI2 (0.954); GLK1 (0.936); IGD1 (0.933); GDB1 (0.929); PIG2 (0.923); TPS3 (0.92); YLR177W (0.902)
Homologues (species, bitscore): GYS1 (Homo sapiens, 751.1); Gys1 (Mus musculus, 745.0); gys2 (Danio rerio, 728.4); gys1 (Xenopus tropicalis, 738.4); GlyS (Drosophila melanogaster, 692.6); gsy-1 (Caenorhabditis elegans, 662.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005300.1:164675-166801:- | gene-YFR015C_AKU4011 | rna-NM_001179980.1_AKU4011 | cds-NP_116670.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000071.1:94043-96169:+ | gene-YFR015C_BG1 | rna-NM_001179980.1_BG1 | cds-NP_116670.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005508.1:165089-167215:- | gene-YFR015C_Bruggeman | rna-NM_001179980.1_Bruggeman | cds-NP_116670.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005524.1:170006-172132:- | gene-YFR015C_CAT1 | rna-NM_001179980.1_CAT1 | cds-NP_116670.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005364.1:165499-167625:- | gene-YFR015C_CBS1585 | rna-NM_001179980.1_CBS1585 | cds-NP_116670.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005348.1:139336-141462:- | gene-YFR015C_CBS436 | rna-NM_001179980.1_CBS436 | cds-NP_116670.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005332.1:165239-167365:- | gene-YFR015C_CBS6412 | rna-NM_001179980.1_CBS6412 | cds-NP_116670.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005316.1:167752-169878:- | gene-YFR015C_CBS6413 | rna-NM_001179980.1_CBS6413 | cds-NP_116670.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001527.1:170357-172483:- | gene-YFR015C_CENPK1137D | rna-NM_001179980.1_CENPK1137D | cds-NP_116670.1_CENPK1137D | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005476.1:163670-165796:- | gene-YFR015C_EthanolRed | rna-NM_001179980.1_EthanolRed | cds-NP_116670.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005540.1:165317-167443:- | gene-YFR015C_FaliES1 | rna-NM_001179980.1_FaliES1 | cds-NP_116670.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000452.1:12151-14277:- | gene-YFR015C_JAY291 | rna-NM_001179980.1_JAY291 | cds-NP_116670.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005412.1:167043-169169:- | gene-YFR015C_MUCL30387 | rna-NM_001179980.1_MUCL30387 | cds-NP_116670.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005444.1:163850-165976:- | gene-YFR015C_MUCL30388 | rna-NM_001179980.1_MUCL30388 | cds-NP_116670.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005284.1:163942-166068:- | gene-YFR015C_MUCL39482 | rna-NM_001179980.1_MUCL39482 | cds-NP_116670.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005428.1:163206-165332:- | gene-YFR015C_MUCL42920 | rna-NM_001179980.1_MUCL42920 | cds-NP_116670.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011815.1:174264-176390:- | gene-YFR015C_NCIM3186 | rna-NM_001179980.1_NCIM3186 | cds-NP_116670.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005268.1:164960-167086:- | gene-YFR015C_NCYC1407 | rna-NM_001179980.1_NCYC1407 | cds-NP_116670.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994145.1:184030-186156:- | gene-YFR015C_PE2H3 | rna-NM_001179980.1_PE2H3 | cds-NP_116670.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999877.1:183578-185704:- | gene-YFR015C_PE2H4 | rna-NM_001179980.1_PE2H4 | cds-NP_116670.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001138.5:174265-176391:- | gene-YFR015C_S288C | rna-NM_001179980.1_S288C | cds-NP_116670.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000011.1:147858-149984:+ | gene-YFR015C_SA1 | rna-NM_001179980.1_SA1 | cds-NP_116670.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005492.1:164475-166601:- | gene-YFR015C_ThermosaccDry | rna-NM_001179980.1_ThermosaccDry | cds-NP_116670.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005460.1:179927-182053:- | gene-YFR015C_VR1 | rna-NM_001179980.1_VR1 | cds-NP_116670.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000013.1:94916-97042:- | gene-YFR015C_ZTW1 | rna-NM_001179980.1_ZTW1 | cds-NP_116670.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047492.1:188845-190971:- | gene-YFR015C_Sparadoxus | rna-NM_001179980.1_Sparadoxus | cds-NP_116670.1_Sparadoxus | 92.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |