Gene name: GSC2
Reference locus (S288C): YGR032W
Gene biotype: protein_coding
Description: Catalytic subunit of 1,3-beta-glucan synthase; involved in formation of the inner layer of the spore wall; activity positively regulated by Rho1p and negatively by Smk1p; GSC2 has a paralog, FKS1, that arose from the whole genome duplication; Belongs to the glycosyltransferase 48 family
Top 10 interactors (score): FKS1 (0.999); RHO1 (0.996); FKS3 (0.983); UGP1 (0.926); YHL012W (0.918); SLT2 (0.872); CRZ1 (0.862); RLM1 (0.861); SMK1 (0.843); SMI1 (0.843); BGL2 (0.826); PKC1 (0.814); ROM2 (0.812); LRG1 (0.801); SWI4 (0.792); SWI6 (0.788); SLG1 (0.768); SEN1 (0.76); TUS1 (0.757); BCK1 (0.75)
Homologues (species, bitscore): GSL12 (Arabidopsis thaliana, 350.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:543875-549571:+ | gene-YGR032W_AKU4011 | rna-NM_001181161.3_AKU4011 | cds-NP_011546.3_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000060.1:26278-31965:- | gene-YGR032W_BG1 | rna-NM_001181161.3_BG1 | cds-NP_011546.3_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:546150-551837:+ | gene-YGR032W_Bruggeman | rna-NM_001181161.3_Bruggeman | cds-NP_011546.3_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:544208-549895:+ | gene-YGR032W_CAT1 | rna-NM_001181161.3_CAT1 | cds-NP_011546.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:545203-550890:+ | gene-YGR032W_CBS1585 | rna-NM_001181161.3_CBS1585 | cds-NP_011546.3_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:539989-545676:+ | gene-YGR032W_CBS436 | rna-NM_001181161.3_CBS436 | cds-NP_011546.3_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:537961-543648:+ | gene-YGR032W_CBS6412 | rna-NM_001181161.3_CBS6412 | cds-NP_011546.3_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:542050-547737:+ | gene-YGR032W_CBS6413 | rna-NM_001181161.3_CBS6413 | cds-NP_011546.3_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:548104-553791:+ | gene-YGR032W_CENPK1137D | rna-NM_001181161.3_CENPK1137D | cds-NP_011546.3_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:532090-537777:+ | gene-YGR032W_EthanolRed | rna-NM_001181161.3_EthanolRed | cds-NP_011546.3_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:535577-541264:+ | gene-YGR032W_FaliES1 | rna-NM_001181161.3_FaliES1 | cds-NP_011546.3_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000020.1:74276-79963:+ | gene-YGR032W_JAY291 | rna-NM_001181161.3_JAY291 | cds-NP_011546.3_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:542784-548471:+ | gene-YGR032W_MUCL30387 | rna-NM_001181161.3_MUCL30387 | cds-NP_011546.3_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:545403-551090:+ | gene-YGR032W_MUCL30388 | rna-NM_001181161.3_MUCL30388 | cds-NP_011546.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:541026-546713:+ | gene-YGR032W_MUCL39482 | rna-NM_001181161.3_MUCL39482 | cds-NP_011546.3_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:550818-556505:+ | gene-YGR032W_MUCL42920 | rna-NM_001181161.3_MUCL42920 | cds-NP_011546.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:548264-553951:+ | gene-YGR032W_NCIM3186 | rna-NM_001181161.3_NCIM3186 | cds-NP_011546.3_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:535211-540898:+ | gene-YGR032W_NCYC1407 | rna-NM_001181161.3_NCYC1407 | cds-NP_011546.3_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:538098-543785:+ | gene-YGR032W_PE2H3 | rna-NM_001181161.3_PE2H3 | cds-NP_011546.3_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:543205-548892:+ | gene-YGR032W_PE2H4 | rna-NM_001181161.3_PE2H4 | cds-NP_011546.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:548264-553951:+ | gene-YGR032W_S288C | rna-NM_001181161.3_S288C | cds-NP_011546.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000021.1:7964-13651:- | gene-YGR032W_SA1 | rna-NM_001181161.3_SA1 | cds-NP_011546.3_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:554914-560601:+ | gene-YGR032W_ThermosaccDry | rna-NM_001181161.3_ThermosaccDry | cds-NP_011546.3_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:645368-651055:+ | gene-YGR032W_VR1 | rna-NM_001181161.3_VR1 | cds-NP_011546.3_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000015.1:10395-16082:+ | gene-YGR032W_ZTW1 | rna-NM_001181161.3_ZTW1 | cds-NP_011546.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:544444-550131:+ | gene-YGR032W_Sparadoxus | rna-NM_001181161.3_Sparadoxus | cds-NP_011546.3_Sparadoxus | 92.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |