GRX7 (YBR014C)


Gene profile

Gene name: GRX7
Reference locus (S288C): YBR014C
Gene biotype: protein_coding

Description: Cis-golgi localized monothiol glutaredoxin; more similar in activity to dithiol than other monothiol glutaredoxins; involved in the oxidative stress response; does not bind metal ions; GRX7 has a paralog, GRX6, that arose from the whole genome duplication

Top 10 interactors (score): GRX8 (0.897); GRX5 (0.854); GRX3 (0.836); GRX4 (0.815); GRX1 (0.814); TRX2 (0.727); GLR1 (0.721); YGL177W (0.699); TRX1 (0.696); TSA2 (0.664); HMX1 (0.591); YBR013C (0.575); YMR103C (0.575); PHM6 (0.568); YLR358C (0.568); TRX3 (0.567); TRR2 (0.532); RPA14 (0.527); GPX1 (0.525); FRE4 (0.524)

Homologues (species, bitscore): GLRX2 (Homo sapiens, 68.2); Glrx2 (Mus musculus, 61.2); glrx2 (Danio rerio, 70.9); txnrd3 (Xenopus tropicalis, 58.9); CG6852 (Drosophila melanogaster, 50.1); F10D7.3 (Caenorhabditis elegans, 68.2); GRXC1 (Arabidopsis thaliana, 63.5)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005296.1:249190-249801:- gene-YBR014C_AKU4011 rna-NM_001178362.1_AKU4011 cds-NP_009570.1_AKU4011 99.6 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000179.1:239296-239907:- gene-YBR014C_BG1 rna-NM_001178362.1_BG1 cds-NP_009570.1_BG1 99.5 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:249893-250504:- gene-YBR014C_Bruggeman rna-NM_001178362.1_Bruggeman cds-NP_009570.1_Bruggeman 99.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005520.1:252174-252785:- gene-YBR014C_CAT1 rna-NM_001178362.1_CAT1 cds-NP_009570.1_CAT1 99.5 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005360.1:241227-241838:- gene-YBR014C_CBS1585 rna-NM_001178362.1_CBS1585 cds-NP_009570.1_CBS1585 99.8 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005344.1:249464-250075:- gene-YBR014C_CBS436 rna-NM_001178362.1_CBS436 cds-NP_009570.1_CBS436 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:339730-340341:- gene-YBR014C_CBS6412 rna-NM_001178362.1_CBS6412 cds-NP_009570.1_CBS6412 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005312.1:246594-247205:- gene-YBR014C_CBS6413 rna-NM_001178362.1_CBS6413 cds-NP_009570.1_CBS6413 99.6 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001523.1:260495-261106:- gene-YBR014C_CENPK1137D rna-NM_001178362.1_CENPK1137D cds-NP_009570.1_CENPK1137D 99.8 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:376187-376798:- gene-YBR014C_EthanolRed rna-NM_001178362.1_EthanolRed cds-NP_009570.1_EthanolRed 99.8 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:264283-264894:- gene-YBR014C_FaliES1 rna-NM_001178362.1_FaliES1 cds-NP_009570.1_FaliES1 99.8 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000048.1:32712-33323:+ gene-YBR014C_JAY291 rna-NM_001178362.1_JAY291 cds-NP_009570.1_JAY291 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005408.1:250244-250855:- gene-YBR014C_MUCL30387 rna-NM_001178362.1_MUCL30387 cds-NP_009570.1_MUCL30387 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:250744-251355:- gene-YBR014C_MUCL30388 rna-NM_001178362.1_MUCL30388 cds-NP_009570.1_MUCL30388 99.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005280.1:241209-241820:- gene-YBR014C_MUCL39482 rna-NM_001178362.1_MUCL39482 cds-NP_009570.1_MUCL39482 99.8 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005424.1:248646-249257:- gene-YBR014C_MUCL42920 rna-NM_001178362.1_MUCL42920 cds-NP_009570.1_MUCL42920 99.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:266522-267133:- gene-YBR014C_NCIM3186 rna-NM_001178362.1_NCIM3186 cds-NP_009570.1_NCIM3186 99.1 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005264.1:242385-242996:- gene-YBR014C_NCYC1407 rna-NM_001178362.1_NCYC1407 cds-NP_009570.1_NCYC1407 99.6 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:254537-255148:- gene-YBR014C_PE2H3 rna-NM_001178362.1_PE2H3 cds-NP_009570.1_PE2H3 99.5 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999873.1:252205-252816:- gene-YBR014C_PE2H4 rna-NM_001178362.1_PE2H4 cds-NP_009570.1_PE2H4 99.5 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:266725-267336:- gene-YBR014C_S288C rna-NM_001178362.1_S288C cds-NP_009570.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000037.1:41364-41975:+ gene-YBR014C_SA1 rna-NM_001178362.1_SA1 cds-NP_009570.1_SA1 99.6 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:263992-264603:- gene-YBR014C_ThermosaccDry rna-NM_001178362.1_ThermosaccDry cds-NP_009570.1_ThermosaccDry 99.8 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005456.1:245889-246500:- gene-YBR014C_VR1 rna-NM_001178362.1_VR1 cds-NP_009570.1_VR1 99.6 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000003.1:239977-240588:- gene-YBR014C_ZTW1 rna-NM_001178362.1_ZTW1 cds-NP_009570.1_ZTW1 99.8 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:276190-276801:- gene-YBR014C_Sparadoxus rna-NM_001178362.1_Sparadoxus cds-NP_009570.1_Sparadoxus 97.0 100.0 Verified 1 1 1 False True False False False

Additional files