GRS2 (YPR081C)


Gene profile

Gene name: GRS2
Reference locus (S288C): YPR081C
Gene biotype: protein_coding

Description: Glycine--tRNA ligase 2; Glycine-tRNA synthetase, not expressed under normal growth conditions; expression is induced under heat, oxidative, pH, or ethanol stress conditions; more stable than the major glycine-tRNA synthetase Grs1p at 37 deg C; GRS2 has a paralog, GRS1, that arose from the whole genome duplication

Top 10 interactors (score): ILS1 (0.973); THS1 (0.962); SES1 (0.948); TEF4 (0.907); CAM1 (0.907); ALA1 (0.9); GUS1 (0.894); MIP1 (0.891); MST1 (0.888); TYS1 (0.88); CCT5 (0.879); DPS1 (0.864); GRS1 (0.859); ARC1 (0.85); YHR020W (0.835); CDC60 (0.832); DIA4 (0.82); KRS1 (0.786); DED81 (0.772); VAS1 (0.758)

Homologues (species, bitscore): GARS (Homo sapiens, 607.1); Gars (Mus musculus, 605.9); gars (Danio rerio, 609.8); gars (Xenopus tropicalis, 594.7); Aats-gly (Drosophila melanogaster, 622.9); gars-1 (Caenorhabditis elegans, 583.9); AT1G29880 (Arabidopsis thaliana, 575.9)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005310.1:673796-675652:- gene-YPR081C_AKU4011 rna-NM_001184178.1_AKU4011 cds-NP_015406.1_AKU4011 99.4 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000091.1:222028-223884:+ gene-YPR081C_BG1 rna-NM_001184178.1_BG1 cds-NP_015406.1_BG1 99.5 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:751475-753331:- gene-YPR081C_Bruggeman rna-NM_001184178.1_Bruggeman cds-NP_015406.1_Bruggeman 99.5 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:795776-797632:- gene-YPR081C_CAT1 rna-NM_001184178.1_CAT1 cds-NP_015406.1_CAT1 99.7 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:677722-679578:- gene-YPR081C_CBS1585 rna-NM_001184178.1_CBS1585 cds-NP_015406.1_CBS1585 99.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005358.1:692347-694203:- gene-YPR081C_CBS436 rna-NM_001184178.1_CBS436 cds-NP_015406.1_CBS436 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005342.1:680858-682714:- gene-YPR081C_CBS6412 rna-NM_001184178.1_CBS6412 cds-NP_015406.1_CBS6412 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:674679-676535:- gene-YPR081C_CBS6413 rna-NM_001184178.1_CBS6413 cds-NP_015406.1_CBS6413 99.5 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:702093-703949:- gene-YPR081C_CENPK1137D rna-NM_001184178.1_CENPK1137D cds-NP_015406.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:1000796-1002652:- gene-YPR081C_EthanolRed rna-NM_001184178.1_EthanolRed cds-NP_015406.1_EthanolRed 99.4 100.0 Unannotated 1 1 0 False False False False True
FaliES1 GCA_001738715.1 Bioethanol Asia CM005550.1:679629-681485:- gene-YPR081C_FaliES1 rna-NM_001184178.1_FaliES1 cds-NP_015406.1_FaliES1 99.4 100.0 Unannotated 1 1 0 False False False False True
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000094.1:1521-3377:- gene-YPR081C_JAY291 rna-NM_001184178.1_JAY291 cds-NP_015406.1_JAY291 99.9 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:692734-694590:- gene-YPR081C_MUCL30387 rna-NM_001184178.1_MUCL30387 cds-NP_015406.1_MUCL30387 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:691438-693294:- gene-YPR081C_MUCL30388 rna-NM_001184178.1_MUCL30388 cds-NP_015406.1_MUCL30388 99.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:670729-672585:- gene-YPR081C_MUCL39482 rna-NM_001184178.1_MUCL39482 cds-NP_015406.1_MUCL39482 99.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:733575-735431:- gene-YPR081C_MUCL42920 rna-NM_001184178.1_MUCL42920 cds-NP_015406.1_MUCL42920 99.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:702097-703953:- gene-YPR081C_NCIM3186 rna-NM_001184178.1_NCIM3186 cds-NP_015406.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:679155-681011:- gene-YPR081C_NCYC1407 rna-NM_001184178.1_NCYC1407 cds-NP_015406.1_NCYC1407 99.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:685557-687413:- gene-YPR081C_PE2H3 rna-NM_001184178.1_PE2H3 cds-NP_015406.1_PE2H3 99.9 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:685205-687061:- gene-YPR081C_PE2H4 rna-NM_001184178.1_PE2H4 cds-NP_015406.1_PE2H4 99.9 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:702114-703970:- gene-YPR081C_S288C rna-NM_001184178.1_S288C cds-NP_015406.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000028.1:234-2090:- gene-YPR081C_SA1 rna-NM_001184178.1_SA1 cds-NP_015406.1_SA1 99.9 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:679404-681260:- gene-YPR081C_ThermosaccDry rna-NM_001184178.1_ThermosaccDry cds-NP_015406.1_ThermosaccDry 99.4 100.0 Unannotated 1 1 0 False False False False True
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:696045-697901:- gene-YPR081C_VR1 rna-NM_001184178.1_VR1 cds-NP_015406.1_VR1 99.9 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000033.1:678623-680479:- gene-YPR081C_ZTW1 rna-NM_001184178.1_ZTW1 cds-NP_015406.1_ZTW1 99.6 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:679318-681174:- gene-YPR081C_Sparadoxus rna-NM_001184178.1_Sparadoxus cds-NP_015406.1_Sparadoxus 88.6 100.0 Verified 1 1 0 False False False True False

Additional files