Gene name: GPX1
Reference locus (S288C): YKL026C
Gene biotype: protein_coding
Description: Glutathione peroxidase-like peroxiredoxin 1; Phospholipid hydroperoxide glutathione peroxidase; induced by glucose starvation that protects cells from phospholipid hydroperoxides and nonphospholipid peroxides during oxidative stress; GPX1 has a paralog, HYR1, that arose from the whole genome duplication
Top 10 interactors (score): GLR1 (0.993); CTT1 (0.962); PRX1 (0.942); GRX1 (0.934); GRX2 (0.93); TSA2 (0.928); AHP1 (0.92); CTA1 (0.917); TSA1 (0.916); SOD2 (0.903); YAP1 (0.884); SOD1 (0.883); TRX3 (0.881); TRX2 (0.877); TRX1 (0.871); UIP4 (0.868); GSH1 (0.868); TRR1 (0.862); SRX1 (0.847); DOT5 (0.822)
Homologues (species, bitscore): GPX7 (Homo sapiens, 106.7); Gpx7 (Mus musculus, 108.6); gpx8 (Danio rerio, 108.6); gpx7 (Xenopus tropicalis, 97.8); PHGPx (Drosophila melanogaster, 110.9); F26E4.12 (Caenorhabditis elegans, 122.5); GPX6 (Arabidopsis thaliana, 145.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:375398-375901:- | gene-YKL026C_AKU4011 | rna-NM_001179592.3_AKU4011 | cds-NP_012899.3_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:268007-268510:+ | gene-YKL026C_BG1 | rna-NM_001179592.3_BG1 | cds-NP_012899.3_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:397093-397596:- | gene-YKL026C_Bruggeman | rna-NM_001179592.3_Bruggeman | cds-NP_012899.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:392208-392711:- | gene-YKL026C_CAT1 | rna-NM_001179592.3_CAT1 | cds-NP_012899.3_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:388117-388620:- | gene-YKL026C_CBS1585 | rna-NM_001179592.3_CBS1585 | cds-NP_012899.3_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:386967-387470:- | gene-YKL026C_CBS436 | rna-NM_001179592.3_CBS436 | cds-NP_012899.3_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:372273-372776:- | gene-YKL026C_CBS6412 | rna-NM_001179592.3_CBS6412 | cds-NP_012899.3_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:387972-388475:- | gene-YKL026C_CBS6413 | rna-NM_001179592.3_CBS6413 | cds-NP_012899.3_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:389057-389560:- | gene-YKL026C_CENPK1137D | rna-NM_001179592.3_CENPK1137D | cds-NP_012899.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:385894-386397:- | gene-YKL026C_EthanolRed | rna-NM_001179592.3_EthanolRed | cds-NP_012899.3_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:387984-388487:- | gene-YKL026C_FaliES1 | rna-NM_001179592.3_FaliES1 | cds-NP_012899.3_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000142.1:42564-43067:+ | gene-YKL026C_JAY291 | rna-NM_001179592.3_JAY291 | cds-NP_012899.3_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:396408-396911:- | gene-YKL026C_MUCL30387 | rna-NM_001179592.3_MUCL30387 | cds-NP_012899.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:392017-392520:- | gene-YKL026C_MUCL30388 | rna-NM_001179592.3_MUCL30388 | cds-NP_012899.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:387434-387937:- | gene-YKL026C_MUCL39482 | rna-NM_001179592.3_MUCL39482 | cds-NP_012899.3_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:393261-393764:- | gene-YKL026C_MUCL42920 | rna-NM_001179592.3_MUCL42920 | cds-NP_012899.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:389369-389872:- | gene-YKL026C_NCIM3186 | rna-NM_001179592.3_NCIM3186 | cds-NP_012899.3_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:387626-388129:- | gene-YKL026C_NCYC1407 | rna-NM_001179592.3_NCYC1407 | cds-NP_012899.3_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:412313-412816:- | gene-YKL026C_PE2H3 | rna-NM_001179592.3_PE2H3 | cds-NP_012899.3_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:397059-397562:- | gene-YKL026C_PE2H4 | rna-NM_001179592.3_PE2H4 | cds-NP_012899.3_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:389380-389883:- | gene-YKL026C_S288C | rna-NM_001179592.3_S288C | cds-NP_012899.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000027.1:67659-68162:- | gene-YKL026C_SA1 | rna-NM_001179592.3_SA1 | cds-NP_012899.3_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:388083-388586:- | gene-YKL026C_ThermosaccDry | rna-NM_001179592.3_ThermosaccDry | cds-NP_012899.3_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:387338-387841:- | gene-YKL026C_VR1 | rna-NM_001179592.3_VR1 | cds-NP_012899.3_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:386111-386614:- | gene-YKL026C_ZTW1 | rna-NM_001179592.3_ZTW1 | cds-NP_012899.3_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:405694-406197:- | gene-YKL026C_Sparadoxus | rna-NM_001179592.3_Sparadoxus | cds-NP_012899.3_Sparadoxus | 88.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |