Gene name: GPP2
Reference locus (S288C): YER062C
Gene biotype: protein_coding
Description: Glycerol-1-phosphate phosphohydrolase 2; DL-glycerol-3-phosphate phosphatase involved in glycerol biosynthesis; also known as glycerol-1-phosphatase; induced in response to hyperosmotic or oxidative stress, and during diauxic shift; GPP2 has a paralog, GPP1, that arose from the whole genome duplication; Belongs to the HAD-like hydrolase superfamily. DOG/GPP family
Top 10 interactors (score): GPD1 (0.989); GCY1 (0.979); GPP1 (0.973); GPD2 (0.97); GUT1 (0.959); ADH6 (0.914); YJU3 (0.901); ADH7 (0.9); GPT2 (0.9); SCT1 (0.9); DAK1 (0.874); YIG1 (0.864); DAK2 (0.815); FPS1 (0.813); HOT1 (0.797); STL1 (0.766); HOG1 (0.766); MSN2 (0.65); YPR1 (0.643); HSP12 (0.637)
Homologues (species, bitscore): Gs1l (Drosophila melanogaster, 55.5); AT1G56500 (Arabidopsis thaliana, 56.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:273724-274476:- | gene-YER062C_AKU4011 | rna-NM_001178953.3_AKU4011 | cds-NP_010984.3_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:151299-152051:+ | gene-YER062C_BG1 | rna-NM_001178953.3_BG1 | cds-NP_010984.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:283036-283788:- | gene-YER062C_Bruggeman | rna-NM_001178953.3_Bruggeman | cds-NP_010984.3_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:276679-277431:- | gene-YER062C_CAT1 | rna-NM_001178953.3_CAT1 | cds-NP_010984.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:273580-274332:- | gene-YER062C_CBS1585 | rna-NM_001178953.3_CBS1585 | cds-NP_010984.3_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:275490-276242:- | gene-YER062C_CBS436 | rna-NM_001178953.3_CBS436 | cds-NP_010984.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:273050-273802:- | gene-YER062C_CBS6412 | rna-NM_001178953.3_CBS6412 | cds-NP_010984.3_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:279056-279808:- | gene-YER062C_CBS6413 | rna-NM_001178953.3_CBS6413 | cds-NP_010984.3_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:277783-278535:- | gene-YER062C_CENPK1137D | rna-NM_001178953.3_CENPK1137D | cds-NP_010984.3_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:274064-274816:- | gene-YER062C_EthanolRed | rna-NM_001178953.3_EthanolRed | cds-NP_010984.3_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:274517-275269:- | gene-YER062C_FaliES1 | rna-NM_001178953.3_FaliES1 | cds-NP_010984.3_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000254.1:1936-2688:- | gene-YER062C_JAY291 | rna-NM_001178953.3_JAY291 | cds-NP_010984.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:278473-279225:- | gene-YER062C_MUCL30387 | rna-NM_001178953.3_MUCL30387 | cds-NP_010984.3_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:274143-274895:- | gene-YER062C_MUCL30388 | rna-NM_001178953.3_MUCL30388 | cds-NP_010984.3_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:272615-273367:- | gene-YER062C_MUCL39482 | rna-NM_001178953.3_MUCL39482 | cds-NP_010984.3_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:279671-280423:- | gene-YER062C_MUCL42920 | rna-NM_001178953.3_MUCL42920 | cds-NP_010984.3_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:279929-280681:- | gene-YER062C_NCIM3186 | rna-NM_001178953.3_NCIM3186 | cds-NP_010984.3_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:277678-278430:- | gene-YER062C_NCYC1407 | rna-NM_001178953.3_NCYC1407 | cds-NP_010984.3_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:288331-289083:- | gene-YER062C_PE2H3 | rna-NM_001178953.3_PE2H3 | cds-NP_010984.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:278272-279024:- | gene-YER062C_PE2H4 | rna-NM_001178953.3_PE2H4 | cds-NP_010984.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:279930-280682:- | gene-YER062C_S288C | rna-NM_001178953.3_S288C | cds-NP_010984.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000059.1:66449-67201:- | gene-YER062C_SA1 | rna-NM_001178953.3_SA1 | cds-NP_010984.3_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:275313-276065:- | gene-YER062C_ThermosaccDry | rna-NM_001178953.3_ThermosaccDry | cds-NP_010984.3_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:275014-275766:- | gene-YER062C_VR1 | rna-NM_001178953.3_VR1 | cds-NP_010984.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:272493-273245:- | gene-YER062C_ZTW1 | rna-NM_001178953.3_ZTW1 | cds-NP_010984.3_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:276430-277182:- | gene-YER062C_Sparadoxus | rna-NM_001178953.3_Sparadoxus | cds-NP_010984.3_Sparadoxus | 92.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |