Gene name: GPM3
Reference locus (S288C): YOL056W
Gene biotype: protein_coding
Description: Homolog of Gpm1p phosphoglycerate mutase; converts 3-phosphoglycerate to 2-phosphoglycerate in glycolysis; may be non-functional; GPM3 has a paralog, GPM2, that arose from the whole genome duplication; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily
Top 10 interactors (score): GPM2 (0.999); GPM1 (0.985); ENO2 (0.976); PGK1 (0.973); ERR1 (0.948); ENO1 (0.948); ERR2 (0.946); ERR3 (0.945); YOR283W (0.935); PGI1 (0.932); FBA1 (0.919); SER3 (0.907); SER33 (0.907); HIS3 (0.903); TDA10 (0.9); NQM1 (0.892); TKL2 (0.881); PFK1 (0.869); TAL1 (0.866); TKL1 (0.866)
Homologues (species, bitscore): BPGM (Homo sapiens, 142.5); Pgam2 (Mus musculus, 142.5); bpgm (Danio rerio, 150.2); bpgm (Xenopus tropicalis, 141.0); Pglym87 (Drosophila melanogaster, 144.4); At1g78050 (Arabidopsis thaliana, 92.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:206959-207870:+ | gene-YOL056W_AKU4011 | rna-NM_001183311.1_AKU4011 | cds-NP_014585.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000152.1:22815-23726:+ | gene-YOL056W_BG1 | rna-NM_001183311.1_BG1 | cds-NP_014585.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:208617-209528:+ | gene-YOL056W_Bruggeman | rna-NM_001183311.1_Bruggeman | cds-NP_014585.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:208133-209044:+ | gene-YOL056W_CAT1 | rna-NM_001183311.1_CAT1 | cds-NP_014585.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:201344-202255:+ | gene-YOL056W_CBS1585 | rna-NM_001183311.1_CBS1585 | cds-NP_014585.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:206499-207410:+ | gene-YOL056W_CBS436 | rna-NM_001183311.1_CBS436 | cds-NP_014585.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:201279-202190:+ | gene-YOL056W_CBS6412 | rna-NM_001183311.1_CBS6412 | cds-NP_014585.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:208228-209139:+ | gene-YOL056W_CBS6413 | rna-NM_001183311.1_CBS6413 | cds-NP_014585.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:222971-223882:+ | gene-YOL056W_CENPK1137D | rna-NM_001183311.1_CENPK1137D | cds-NP_014585.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:204055-204966:+ | gene-YOL056W_EthanolRed | rna-NM_001183311.1_EthanolRed | cds-NP_014585.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:206599-207510:+ | gene-YOL056W_FaliES1 | rna-NM_001183311.1_FaliES1 | cds-NP_014585.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000018.1:58055-58966:- | gene-YOL056W_JAY291 | rna-NM_001183311.1_JAY291 | cds-NP_014585.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:212385-213296:+ | gene-YOL056W_MUCL30387 | rna-NM_001183311.1_MUCL30387 | cds-NP_014585.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:216681-217592:+ | gene-YOL056W_MUCL30388 | rna-NM_001183311.1_MUCL30388 | cds-NP_014585.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:209271-210182:+ | gene-YOL056W_MUCL39482 | rna-NM_001183311.1_MUCL39482 | cds-NP_014585.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:224738-225649:+ | gene-YOL056W_MUCL42920 | rna-NM_001183311.1_MUCL42920 | cds-NP_014585.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:223157-224068:+ | gene-YOL056W_NCIM3186 | rna-NM_001183311.1_NCIM3186 | cds-NP_014585.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:215888-216799:+ | gene-YOL056W_NCYC1407 | rna-NM_001183311.1_NCYC1407 | cds-NP_014585.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:198901-199812:+ | gene-YOL056W_PE2H3 | rna-NM_001183311.1_PE2H3 | cds-NP_014585.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:209875-210786:+ | gene-YOL056W_PE2H4 | rna-NM_001183311.1_PE2H4 | cds-NP_014585.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:223268-224179:+ | gene-YOL056W_S288C | rna-NM_001183311.1_S288C | cds-NP_014585.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:191254-192165:+ | gene-YOL056W_SA1 | rna-NM_001183311.1_SA1 | cds-NP_014585.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:205607-206518:+ | gene-YOL056W_ThermosaccDry | rna-NM_001183311.1_ThermosaccDry | cds-NP_014585.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:206331-207242:+ | gene-YOL056W_VR1 | rna-NM_001183311.1_VR1 | cds-NP_014585.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000031.1:205249-206160:+ | gene-YOL056W_ZTW1 | rna-NM_001183311.1_ZTW1 | cds-NP_014585.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:208743-209654:+ | gene-YOL056W_Sparadoxus | rna-NM_001183311.1_Sparadoxus | cds-NP_014585.1_Sparadoxus | 90.0 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |