Gene name: GPI17
Reference locus (S288C): YDR434W
Gene biotype: protein_coding
Description: GPI transamidase component GPI17; Transmembrane protein; subunit of the glycosylphosphatidylinositol transamidase complex that adds GPIs to newly synthesized proteins; human PIG-S homolog; Belongs to the PIGS family
Top 10 interactors (score): GPI16 (0.999); GAB1 (0.999); GAA1 (0.999); GPI8 (0.999); BST1 (0.982); ALG3 (0.922); GPI14 (0.906); GPI10 (0.894); GPI11 (0.864); GPI13 (0.851); SPT14 (0.842); GPI1 (0.813); GPI18 (0.8); GPI12 (0.76); GPI2 (0.724); YHR140W (0.706); GPI15 (0.691); CLU1 (0.655); GPI19 (0.651); CNB1 (0.639)
Homologues (species, bitscore): PIGS (Homo sapiens, 89.4); Pigs (Mus musculus, 81.3); pigs (Danio rerio, 92.8); pigs (Xenopus tropicalis, 87.4); PIG-S (Drosophila melanogaster, 76.3); AT3G07180 (Arabidopsis thaliana, 64.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1271507-1273111:+ | gene-YDR434W_AKU4011 | rna-NM_001180742.3_AKU4011 | cds-NP_010722.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000039.1:149845-151449:+ | gene-YDR434W_BG1 | rna-NM_001180742.3_BG1 | cds-NP_010722.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1301894-1303498:+ | gene-YDR434W_Bruggeman | rna-NM_001180742.3_Bruggeman | cds-NP_010722.3_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1280083-1281687:+ | gene-YDR434W_CAT1 | rna-NM_001180742.3_CAT1 | cds-NP_010722.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1265815-1267419:+ | gene-YDR434W_CBS1585 | rna-NM_001180742.3_CBS1585 | cds-NP_010722.3_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1285167-1286771:+ | gene-YDR434W_CBS436 | rna-NM_001180742.3_CBS436 | cds-NP_010722.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1261802-1263406:+ | gene-YDR434W_CBS6412 | rna-NM_001180742.3_CBS6412 | cds-NP_010722.3_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1283951-1285555:+ | gene-YDR434W_CBS6413 | rna-NM_001180742.3_CBS6413 | cds-NP_010722.3_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1329915-1331519:+ | gene-YDR434W_CENPK1137D | rna-NM_001180742.3_CENPK1137D | cds-NP_010722.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1275084-1276688:+ | gene-YDR434W_EthanolRed | rna-NM_001180742.3_EthanolRed | cds-NP_010722.3_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1278391-1279995:+ | gene-YDR434W_FaliES1 | rna-NM_001180742.3_FaliES1 | cds-NP_010722.3_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000263.1:22649-24253:+ | gene-YDR434W_JAY291 | rna-NM_001180742.3_JAY291 | cds-NP_010722.3_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1285535-1287139:+ | gene-YDR434W_MUCL30387 | rna-NM_001180742.3_MUCL30387 | cds-NP_010722.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1267471-1269075:+ | gene-YDR434W_MUCL30388 | rna-NM_001180742.3_MUCL30388 | cds-NP_010722.3_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1257307-1258911:+ | gene-YDR434W_MUCL39482 | rna-NM_001180742.3_MUCL39482 | cds-NP_010722.3_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1199727-1201331:+ | gene-YDR434W_MUCL42920 | rna-NM_001180742.3_MUCL42920 | cds-NP_010722.3_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1331160-1332764:+ | gene-YDR434W_NCIM3186 | rna-NM_001180742.3_NCIM3186 | cds-NP_010722.3_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1271092-1272696:+ | gene-YDR434W_NCYC1407 | rna-NM_001180742.3_NCYC1407 | cds-NP_010722.3_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1281893-1283497:+ | gene-YDR434W_PE2H3 | rna-NM_001180742.3_PE2H3 | cds-NP_010722.3_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1287461-1289065:+ | gene-YDR434W_PE2H4 | rna-NM_001180742.3_PE2H4 | cds-NP_010722.3_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1331237-1332841:+ | gene-YDR434W_S288C | rna-NM_001180742.3_S288C | cds-NP_010722.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000082.1:24375-25979:- | gene-YDR434W_SA1 | rna-NM_001180742.3_SA1 | cds-NP_010722.3_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1282653-1284257:+ | gene-YDR434W_ThermosaccDry | rna-NM_001180742.3_ThermosaccDry | cds-NP_010722.3_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1297874-1299478:+ | gene-YDR434W_VR1 | rna-NM_001180742.3_VR1 | cds-NP_010722.3_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:325294-326898:+ | gene-YDR434W_ZTW1 | rna-NM_001180742.3_ZTW1 | cds-NP_010722.3_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1279055-1280656:+ | gene-YDR434W_Sparadoxus | rna-NM_001180742.3_Sparadoxus | cds-NP_010722.3_Sparadoxus | 90.7 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |