Gene name: GPI16
Reference locus (S288C): YHR188C
Gene biotype: protein_coding
Description: GPI transamidase component GPI16; Subunit of the glycosylphosphatidylinositol transamidase complex; transmembrane protein; adds GPIs to newly synthesized proteins; human PIG-Tp homolog
Top 10 interactors (score): GPI8 (0.999); GPI17 (0.999); GAB1 (0.999); GAA1 (0.999); BST1 (0.988); GPI13 (0.951); GPI10 (0.942); GPI11 (0.939); GPI14 (0.937); GPI2 (0.916); SPT14 (0.91); GPI12 (0.909); GPI18 (0.875); GPI19 (0.859); MCD4 (0.77); GPI1 (0.738); GPI15 (0.732); CWH43 (0.722); LAS21 (0.697); YHR140W (0.696)
Homologues (species, bitscore): PIGT (Homo sapiens, 227.3); Pigt (Mus musculus, 229.9); pigt (Danio rerio, 226.5); pigt (Xenopus tropicalis, 234.2); CG11190 (Drosophila melanogaster, 193.4); F17C11.7 (Caenorhabditis elegans, 160.6); AT3G07140 (Arabidopsis thaliana, 220.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:469085-470917:- | gene-YHR188C_AKU4011 | rna-NM_001179319.1_AKU4011 | cds-NP_012058.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:46832-48664:+ | gene-YHR188C_BG1 | rna-NM_001179319.1_BG1 | cds-NP_012058.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:476327-478159:- | gene-YHR188C_Bruggeman | rna-NM_001179319.1_Bruggeman | cds-NP_012058.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:472602-474434:- | gene-YHR188C_CAT1 | rna-NM_001179319.1_CAT1 | cds-NP_012058.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:468537-470369:- | gene-YHR188C_CBS1585 | rna-NM_001179319.1_CBS1585 | cds-NP_012058.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:466477-468309:- | gene-YHR188C_CBS436 | rna-NM_001179319.1_CBS436 | cds-NP_012058.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:468636-470468:- | gene-YHR188C_CBS6412 | rna-NM_001179319.1_CBS6412 | cds-NP_012058.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:469927-471759:- | gene-YHR188C_CBS6413 | rna-NM_001179319.1_CBS6413 | cds-NP_012058.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:475193-477025:- | gene-YHR188C_CENPK1137D | rna-NM_001179319.1_CENPK1137D | cds-NP_012058.1_CENPK1137D | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:527624-529456:- | gene-YHR188C_EthanolRed | rna-NM_001179319.1_EthanolRed | cds-NP_012058.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:470068-471900:- | gene-YHR188C_FaliES1 | rna-NM_001179319.1_FaliES1 | cds-NP_012058.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000147.1:15228-17060:- | gene-YHR188C_JAY291 | rna-NM_001179319.1_JAY291 | cds-NP_012058.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:477653-479485:- | gene-YHR188C_MUCL30387 | rna-NM_001179319.1_MUCL30387 | cds-NP_012058.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:477076-478908:- | gene-YHR188C_MUCL30388 | rna-NM_001179319.1_MUCL30388 | cds-NP_012058.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:468448-470280:- | gene-YHR188C_MUCL39482 | rna-NM_001179319.1_MUCL39482 | cds-NP_012058.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:476392-478224:- | gene-YHR188C_MUCL42920 | rna-NM_001179319.1_MUCL42920 | cds-NP_012058.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:481887-483719:- | gene-YHR188C_NCIM3186 | rna-NM_001179319.1_NCIM3186 | cds-NP_012058.1_NCIM3186 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:470911-472743:- | gene-YHR188C_NCYC1407 | rna-NM_001179319.1_NCYC1407 | cds-NP_012058.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:470067-471899:- | gene-YHR188C_PE2H3 | rna-NM_001179319.1_PE2H3 | cds-NP_012058.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:477494-479326:- | gene-YHR188C_PE2H4 | rna-NM_001179319.1_PE2H4 | cds-NP_012058.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:482005-483837:- | gene-YHR188C_S288C | rna-NM_001179319.1_S288C | cds-NP_012058.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000079.1:30154-31986:- | gene-YHR188C_SA1 | rna-NM_001179319.1_SA1 | cds-NP_012058.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:471151-472983:- | gene-YHR188C_ThermosaccDry | rna-NM_001179319.1_ThermosaccDry | cds-NP_012058.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:480369-482201:- | gene-YHR188C_VR1 | rna-NM_001179319.1_VR1 | cds-NP_012058.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:461386-463218:- | gene-YHR188C_ZTW1 | rna-NM_001179319.1_ZTW1 | cds-NP_012058.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:468087-469919:- | gene-YHR188C_Sparadoxus | rna-NM_001179319.1_Sparadoxus | cds-NP_012058.1_Sparadoxus | 90.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |