GPI14 (YJR013W)


Gene profile

Gene name: GPI14
Reference locus (S288C): YJR013W
Gene biotype: protein_coding

Description: GPI mannosyltransferase 1; Glycosylphosphatidylinositol-alpha 1,4 mannosyltransferase I; involved in GPI anchor biosynthesis, requires Pbn1p for function; homolog of mammalian PIG-M

Top 10 interactors (score): GPI18 (0.999); GPI10 (0.999); PBN1 (0.989); GPI12 (0.984); DPM1 (0.98); SPT14 (0.975); GPI2 (0.972); GWT1 (0.968); SMP3 (0.947); GPI8 (0.945); GPI13 (0.937); GPI16 (0.937); GPI19 (0.934); GAA1 (0.925); GPI1 (0.916); GPI17 (0.906); ALG3 (0.904); GPI11 (0.896); PMT4 (0.853); BST1 (0.845)

Homologues (species, bitscore): PIGM (Homo sapiens, 272.3); Pigm (Mus musculus, 271.6); pigm (Danio rerio, 280.8); pigm (Xenopus tropicalis, 280.4); CG9865 (Drosophila melanogaster, 190.7); B0491.1 (Caenorhabditis elegans, 245.4); PNT1 (Arabidopsis thaliana, 245.4)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:443536-444747:+ gene-YJR013W_AKU4011 rna-NM_001181671.1_AKU4011 cds-NP_012547.2_AKU4011 100.0 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000190.1:167987-169198:- gene-YJR013W_BG1 rna-NM_001181671.1_BG1 cds-NP_012547.2_BG1 99.5 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:457628-458839:+ gene-YJR013W_Bruggeman rna-NM_001181671.1_Bruggeman cds-NP_012547.2_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:461568-462779:+ gene-YJR013W_CAT1 rna-NM_001181671.1_CAT1 cds-NP_012547.2_CAT1 99.5 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:455125-456336:+ gene-YJR013W_CBS1585 rna-NM_001181671.1_CBS1585 cds-NP_012547.2_CBS1585 100.0 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005352.1:474097-475308:+ gene-YJR013W_CBS436 rna-NM_001181671.1_CBS436 cds-NP_012547.2_CBS436 99.3 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005336.1:443356-444567:+ gene-YJR013W_CBS6412 rna-NM_001181671.1_CBS6412 cds-NP_012547.2_CBS6412 99.9 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005320.1:445579-446790:+ gene-YJR013W_CBS6413 rna-NM_001181671.1_CBS6413 cds-NP_012547.2_CBS6413 100.0 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:442867-444078:+ gene-YJR013W_CENPK1137D rna-NM_001181671.1_CENPK1137D cds-NP_012547.2_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:448519-449730:+ gene-YJR013W_EthanolRed rna-NM_001181671.1_EthanolRed cds-NP_012547.2_EthanolRed 99.9 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:459735-460946:+ gene-YJR013W_FaliES1 rna-NM_001181671.1_FaliES1 cds-NP_012547.2_FaliES1 99.8 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000384.1:5974-7185:+ gene-YJR013W_JAY291 rna-NM_001181671.1_JAY291 cds-NP_012547.2_JAY291 99.4 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:457944-459155:+ gene-YJR013W_MUCL30387 rna-NM_001181671.1_MUCL30387 cds-NP_012547.2_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:454481-455692:+ gene-YJR013W_MUCL30388 rna-NM_001181671.1_MUCL30388 cds-NP_012547.2_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005288.1:448579-449790:+ gene-YJR013W_MUCL39482 rna-NM_001181671.1_MUCL39482 cds-NP_012547.2_MUCL39482 100.0 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:453890-455101:+ gene-YJR013W_MUCL42920 rna-NM_001181671.1_MUCL42920 cds-NP_012547.2_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:460361-461572:+ gene-YJR013W_NCIM3186 rna-NM_001181671.1_NCIM3186 cds-NP_012547.2_NCIM3186 99.9 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005272.1:446436-447647:+ gene-YJR013W_NCYC1407 rna-NM_001181671.1_NCYC1407 cds-NP_012547.2_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:464751-465962:+ gene-YJR013W_PE2H3 rna-NM_001181671.1_PE2H3 cds-NP_012547.2_PE2H3 99.4 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:458445-459656:+ gene-YJR013W_PE2H4 rna-NM_001181671.1_PE2H4 cds-NP_012547.2_PE2H4 99.5 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:460382-461593:+ gene-YJR013W_S288C rna-NM_001181671.1_S288C cds-NP_012547.2_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000003.1:256377-257588:+ gene-YJR013W_SA1 rna-NM_001181671.1_SA1 cds-NP_012547.2_SA1 99.4 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:453385-454596:+ gene-YJR013W_ThermosaccDry rna-NM_001181671.1_ThermosaccDry cds-NP_012547.2_ThermosaccDry 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:455670-456881:+ gene-YJR013W_VR1 rna-NM_001181671.1_VR1 cds-NP_012547.2_VR1 99.4 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:433314-434525:+ gene-YJR013W_ZTW1 rna-NM_001181671.1_ZTW1 cds-NP_012547.2_ZTW1 99.9 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:458167-459378:+ gene-YJR013W_Sparadoxus rna-NM_001181671.1_Sparadoxus cds-NP_012547.2_Sparadoxus 88.5 100.0 Verified 1 1 1 False True False False False

Additional files