GPI11 (YDR302W)


Gene profile

Gene name: GPI11
Reference locus (S288C): YDR302W
Gene biotype: protein_coding

Description: Glycosylphosphatidylinositol anchor biosynthesis protein 11; ER membrane protein involved in a late step of GPI anchor assembly; involved in the addition of phosphoethanolamine to the multiply mannosylated glycosylphosphatidylinositol (GPI) intermediate; human PIG-Fp is a functional homolog

Top 10 interactors (score): GPI13 (0.998); GPI10 (0.998); GAA1 (0.967); MCD4 (0.961); LAS21 (0.957); SMP3 (0.953); GPI16 (0.939); GPI18 (0.932); GPI14 (0.896); GPI12 (0.882); GPI19 (0.868); GPI17 (0.864); GPI15 (0.796); SPT14 (0.784); MAN2 (0.779); ALG9 (0.745); GAB1 (0.729); ALG12 (0.728); GPI8 (0.713); GLY1 (0.586)

Homologues (species, bitscore): PIGF (Homo sapiens, 53.9); Pigf (Mus musculus, 58.2); pigf (Danio rerio, 53.1); pigf (Xenopus tropicalis, 55.8); CG9376 (Drosophila melanogaster, 55.1)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:1019744-1020403:+ gene-YDR302W_AKU4011 rna-NM_001180610.1_AKU4011 cds-NP_010588.1_AKU4011 99.3 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000080.1:111173-111832:- gene-YDR302W_BG1 rna-NM_001180610.1_BG1 cds-NP_010588.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:1047011-1047670:+ gene-YDR302W_Bruggeman rna-NM_001180610.1_Bruggeman cds-NP_010588.1_Bruggeman 99.8 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:1034008-1034667:+ gene-YDR302W_CAT1 rna-NM_001180610.1_CAT1 cds-NP_010588.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:1014189-1014848:+ gene-YDR302W_CBS1585 rna-NM_001180610.1_CBS1585 cds-NP_010588.1_CBS1585 99.3 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005346.1:1032559-1033218:+ gene-YDR302W_CBS436 rna-NM_001180610.1_CBS436 cds-NP_010588.1_CBS436 99.8 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:1010871-1011530:+ gene-YDR302W_CBS6412 rna-NM_001180610.1_CBS6412 cds-NP_010588.1_CBS6412 99.5 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:1032109-1032768:+ gene-YDR302W_CBS6413 rna-NM_001180610.1_CBS6413 cds-NP_010588.1_CBS6413 99.3 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:1066373-1067032:+ gene-YDR302W_CENPK1137D rna-NM_001180610.1_CENPK1137D cds-NP_010588.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:1018099-1018758:+ gene-YDR302W_EthanolRed rna-NM_001180610.1_EthanolRed cds-NP_010588.1_EthanolRed 99.3 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:1026501-1027160:+ gene-YDR302W_FaliES1 rna-NM_001180610.1_FaliES1 cds-NP_010588.1_FaliES1 99.3 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000130.1:44293-44952:+ gene-YDR302W_JAY291 rna-NM_001180610.1_JAY291 cds-NP_010588.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:1032496-1033155:+ gene-YDR302W_MUCL30387 rna-NM_001180610.1_MUCL30387 cds-NP_010588.1_MUCL30387 99.8 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:1019593-1020252:+ gene-YDR302W_MUCL30388 rna-NM_001180610.1_MUCL30388 cds-NP_010588.1_MUCL30388 99.6 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:1005995-1006654:+ gene-YDR302W_MUCL39482 rna-NM_001180610.1_MUCL39482 cds-NP_010588.1_MUCL39482 99.3 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:945961-946620:+ gene-YDR302W_MUCL42920 rna-NM_001180610.1_MUCL42920 cds-NP_010588.1_MUCL42920 99.8 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:1067654-1068313:+ gene-YDR302W_NCIM3186 rna-NM_001180610.1_NCIM3186 cds-NP_010588.1_NCIM3186 99.3 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:1019288-1019947:+ gene-YDR302W_NCYC1407 rna-NM_001180610.1_NCYC1407 cds-NP_010588.1_NCYC1407 99.3 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:1030266-1030925:+ gene-YDR302W_PE2H3 rna-NM_001180610.1_PE2H3 cds-NP_010588.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:1035851-1036510:+ gene-YDR302W_PE2H4 rna-NM_001180610.1_PE2H4 cds-NP_010588.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:1067731-1068390:+ gene-YDR302W_S288C rna-NM_001180610.1_S288C cds-NP_010588.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000025.1:44466-45125:+ gene-YDR302W_SA1 rna-NM_001180610.1_SA1 cds-NP_010588.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:1030774-1031433:+ gene-YDR302W_ThermosaccDry rna-NM_001180610.1_ThermosaccDry cds-NP_010588.1_ThermosaccDry 99.3 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:1046685-1047344:+ gene-YDR302W_VR1 rna-NM_001180610.1_VR1 cds-NP_010588.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000008.1:74889-75548:+ gene-YDR302W_ZTW1 rna-NM_001180610.1_ZTW1 cds-NP_010588.1_ZTW1 99.3 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:1026329-1026988:+ gene-YDR302W_Sparadoxus rna-NM_001180610.1_Sparadoxus cds-NP_010588.1_Sparadoxus 92.5 100.0 Verified 1 1 1 False True False False False

Additional files