Gene name: GPI10
Reference locus (S288C): YGL142C
Gene biotype: protein_coding
Description: GPI mannosyltransferase 3; Integral membrane protein involved in GPI anchor synthesis; putative alpha 1,2 mannosyltransferase required for addition of the third mannose onto the glycosylphosphatidylinositol (GPI) core structure; human PIG-Bp is a functional homolog
Top 10 interactors (score): GPI18 (0.999); GPI14 (0.999); GPI11 (0.998); GPI13 (0.998); MCD4 (0.998); PBN1 (0.989); GAA1 (0.98); SMP3 (0.976); GPI12 (0.973); GPI19 (0.972); SPT14 (0.971); DPM1 (0.963); GPI8 (0.955); GPI16 (0.942); GAB1 (0.922); GPI2 (0.921); ALG3 (0.919); LAS21 (0.898); GPI17 (0.894); BST1 (0.892)
Homologues (species, bitscore): PIGB (Homo sapiens, 196.4); Pigb (Mus musculus, 208.4); pigb (Danio rerio, 202.6); PIGB (Xenopus tropicalis, 149.4); CG12006 (Drosophila melanogaster, 186.0); T27F7.4 (Caenorhabditis elegans, 122.5); AT5G14850 (Arabidopsis thaliana, 204.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:238856-240706:- | gene-YGL142C_AKU4011 | rna-NM_001181007.1_AKU4011 | cds-NP_011373.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:164245-166095:+ | gene-YGL142C_BG1 | rna-NM_001181007.1_BG1 | cds-NP_011373.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:241281-243131:- | gene-YGL142C_Bruggeman | rna-NM_001181007.1_Bruggeman | cds-NP_011373.1_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:236873-238723:- | gene-YGL142C_CAT1 | rna-NM_001181007.1_CAT1 | cds-NP_011373.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:242238-244088:- | gene-YGL142C_CBS1585 | rna-NM_001181007.1_CBS1585 | cds-NP_011373.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:236830-238680:- | gene-YGL142C_CBS436 | rna-NM_001181007.1_CBS436 | cds-NP_011373.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:228448-230298:- | gene-YGL142C_CBS6412 | rna-NM_001181007.1_CBS6412 | cds-NP_011373.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:236794-238644:- | gene-YGL142C_CBS6413 | rna-NM_001181007.1_CBS6413 | cds-NP_011373.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:236531-238381:- | gene-YGL142C_CENPK1137D | rna-NM_001181007.1_CENPK1137D | cds-NP_011373.1_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:228997-230847:- | gene-YGL142C_EthanolRed | rna-NM_001181007.1_EthanolRed | cds-NP_011373.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:230243-232093:- | gene-YGL142C_FaliES1 | rna-NM_001181007.1_FaliES1 | cds-NP_011373.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000090.1:80072-81922:- | gene-YGL142C_JAY291 | rna-NM_001181007.1_JAY291 | cds-NP_011373.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:238251-240101:- | gene-YGL142C_MUCL30387 | rna-NM_001181007.1_MUCL30387 | cds-NP_011373.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:241366-243216:- | gene-YGL142C_MUCL30388 | rna-NM_001181007.1_MUCL30388 | cds-NP_011373.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:239019-240869:- | gene-YGL142C_MUCL39482 | rna-NM_001181007.1_MUCL39482 | cds-NP_011373.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:242240-244090:- | gene-YGL142C_MUCL42920 | rna-NM_001181007.1_MUCL42920 | cds-NP_011373.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:236269-238119:- | gene-YGL142C_NCIM3186 | rna-NM_001181007.1_NCIM3186 | cds-NP_011373.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:230509-232359:- | gene-YGL142C_NCYC1407 | rna-NM_001181007.1_NCYC1407 | cds-NP_011373.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:232375-234225:- | gene-YGL142C_PE2H3 | rna-NM_001181007.1_PE2H3 | cds-NP_011373.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:237370-239220:- | gene-YGL142C_PE2H4 | rna-NM_001181007.1_PE2H4 | cds-NP_011373.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:236269-238119:- | gene-YGL142C_S288C | rna-NM_001181007.1_S288C | cds-NP_011373.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000081.1:16630-18480:+ | gene-YGL142C_SA1 | rna-NM_001181007.1_SA1 | cds-NP_011373.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:230472-232322:- | gene-YGL142C_ThermosaccDry | rna-NM_001181007.1_ThermosaccDry | cds-NP_011373.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:237289-239139:- | gene-YGL142C_VR1 | rna-NM_001181007.1_VR1 | cds-NP_011373.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:228579-230429:- | gene-YGL142C_ZTW1 | rna-NM_001181007.1_ZTW1 | cds-NP_011373.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:234641-236491:- | gene-YGL142C_Sparadoxus | rna-NM_001181007.1_Sparadoxus | cds-NP_011373.1_Sparadoxus | 86.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |