Gene name: GPI1
Reference locus (S288C): YGR216C
Gene biotype: protein_coding
Description: Phosphatidylinositol N-acetylglucosaminyltransferase subunit GPI1; Membrane protein involved in the synthesis of GlcNAc-PI; N-acetylglucosaminyl phosphatidylinositol (GlcNAc-PI) is the first intermediate in the synthesis of glycosylphosphatidylinositol (GPI) anchors; human and mouse GPI1p are functional homologs
Top 10 interactors (score): GPI2 (0.999); SPT14 (0.998); GPI12 (0.996); GPI19 (0.994); ERI1 (0.974); GPI18 (0.942); GPI15 (0.935); GPI14 (0.916); GPI13 (0.909); GPI8 (0.906); DPM1 (0.893); GPI10 (0.883); GWT1 (0.871); LAS21 (0.853); MCD4 (0.852); GPI17 (0.813); PIS1 (0.802); GPI16 (0.738); GAA1 (0.726); SMP3 (0.711)
Homologues (species, bitscore): PIGQ (Homo sapiens, 134.8); Pigq (Mus musculus, 151.8); pigq (Danio rerio, 147.1); pigq (Xenopus tropicalis, 151.0); Gpi1 (Drosophila melanogaster, 92.4); F01G4.5 (Caenorhabditis elegans, 57.4); AT3G57170 (Arabidopsis thaliana, 90.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:888153-889982:- | gene-YGR216C_AKU4011 | rna-NM_001181345.1_AKU4011 | cds-NP_011732.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:168532-170361:- | gene-YGR216C_BG1 | rna-NM_001181345.1_BG1 | cds-NP_011732.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:896347-898176:- | gene-YGR216C_Bruggeman | rna-NM_001181345.1_Bruggeman | cds-NP_011732.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:894346-896175:- | gene-YGR216C_CAT1 | rna-NM_001181345.1_CAT1 | cds-NP_011732.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:891593-893422:- | gene-YGR216C_CBS1585 | rna-NM_001181345.1_CBS1585 | cds-NP_011732.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:894940-896769:- | gene-YGR216C_CBS436 | rna-NM_001181345.1_CBS436 | cds-NP_011732.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:882463-884292:- | gene-YGR216C_CBS6412 | rna-NM_001181345.1_CBS6412 | cds-NP_011732.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:888522-890351:- | gene-YGR216C_CBS6413 | rna-NM_001181345.1_CBS6413 | cds-NP_011732.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:922342-924171:- | gene-YGR216C_CENPK1137D | rna-NM_001181345.1_CENPK1137D | cds-NP_011732.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:876973-878802:- | gene-YGR216C_EthanolRed | rna-NM_001181345.1_EthanolRed | cds-NP_011732.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:881364-883193:- | gene-YGR216C_FaliES1 | rna-NM_001181345.1_FaliES1 | cds-NP_011732.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000282.1:1023-2852:- | gene-YGR216C_JAY291 | rna-NM_001181345.1_JAY291 | cds-NP_011732.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:893832-895661:- | gene-YGR216C_MUCL30387 | rna-NM_001181345.1_MUCL30387 | cds-NP_011732.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:893518-895347:- | gene-YGR216C_MUCL30388 | rna-NM_001181345.1_MUCL30388 | cds-NP_011732.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:886669-888498:- | gene-YGR216C_MUCL39482 | rna-NM_001181345.1_MUCL39482 | cds-NP_011732.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:904210-906039:- | gene-YGR216C_MUCL42920 | rna-NM_001181345.1_MUCL42920 | cds-NP_011732.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:922633-924462:- | gene-YGR216C_NCIM3186 | rna-NM_001181345.1_NCIM3186 | cds-NP_011732.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:882325-884154:- | gene-YGR216C_NCYC1407 | rna-NM_001181345.1_NCYC1407 | cds-NP_011732.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:906927-908756:- | gene-YGR216C_PE2H3 | rna-NM_001181345.1_PE2H3 | cds-NP_011732.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:912037-913866:- | gene-YGR216C_PE2H4 | rna-NM_001181345.1_PE2H4 | cds-NP_011732.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:922633-924462:- | gene-YGR216C_S288C | rna-NM_001181345.1_S288C | cds-NP_011732.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000045.1:76929-78758:+ | gene-YGR216C_SA1 | rna-NM_001181345.1_SA1 | cds-NP_011732.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:901875-903704:- | gene-YGR216C_ThermosaccDry | rna-NM_001181345.1_ThermosaccDry | cds-NP_011732.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:1006355-1008184:- | gene-YGR216C_VR1 | rna-NM_001181345.1_VR1 | cds-NP_011732.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:203316-205145:- | gene-YGR216C_ZTW1 | rna-NM_001181345.1_ZTW1 | cds-NP_011732.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:893798-895627:- | gene-YGR216C_Sparadoxus | rna-NM_001181345.1_Sparadoxus | cds-NP_011732.1_Sparadoxus | 89.1 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |