Gene name: GPD2
Reference locus (S288C): YOL059W
Gene biotype: protein_coding
Description: Glycerol-3-phosphate dehydrogenase [NAD(+)] 2, mitochondrial; NAD-dependent glycerol 3-phosphate dehydrogenase; expression is controlled by an oxygen-independent signaling pathway required to regulate metabolism under anoxic conditions; located in cytosol and mitochondria; constitutively active but is inactivated via phosphorylation by energy-stress responsive kinase SNF1; GPD2 has a paralog, GPD1, that arose from the whole genome duplication
Top 10 interactors (score): GPD1 (0.982); DAK1 (0.971); GUT2 (0.971); GPP2 (0.97); GPP1 (0.967); DAK2 (0.943); GPT2 (0.923); SCT1 (0.923); PAH1 (0.858); LPP1 (0.808); DPP1 (0.808); BAT1 (0.774); FMO1 (0.749); GUT1 (0.749); SLC1 (0.743); TPI1 (0.735); ALE1 (0.674); FBP26 (0.67); PUF3 (0.669); RIM11 (0.651)
Homologues (species, bitscore): GPD1 (Homo sapiens, 312.4); Gpd1 (Mus musculus, 320.5); gpd1b (Danio rerio, 310.8); gpd1 (Xenopus tropicalis, 304.7); Gpdh (Drosophila melanogaster, 297.0); gpdh-2 (Caenorhabditis elegans, 311.2); GPDHp (Arabidopsis thaliana, 300.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:200807-202129:+ | gene-YOL059W_AKU4011 | rna-NM_001183314.1_AKU4011 | cds-NP_014582.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000152.1:16677-17999:+ | gene-YOL059W_BG1 | rna-NM_001183314.1_BG1 | cds-NP_014582.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:202476-203798:+ | gene-YOL059W_Bruggeman | rna-NM_001183314.1_Bruggeman | cds-NP_014582.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:201990-203312:+ | gene-YOL059W_CAT1 | rna-NM_001183314.1_CAT1 | cds-NP_014582.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:195198-196520:+ | gene-YOL059W_CBS1585 | rna-NM_001183314.1_CBS1585 | cds-NP_014582.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:200357-201679:+ | gene-YOL059W_CBS436 | rna-NM_001183314.1_CBS436 | cds-NP_014582.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:195127-196449:+ | gene-YOL059W_CBS6412 | rna-NM_001183314.1_CBS6412 | cds-NP_014582.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:202063-203385:+ | gene-YOL059W_CBS6413 | rna-NM_001183314.1_CBS6413 | cds-NP_014582.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:216829-218151:+ | gene-YOL059W_CENPK1137D | rna-NM_001183314.1_CENPK1137D | cds-NP_014582.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:197905-199227:+ | gene-YOL059W_EthanolRed | rna-NM_001183314.1_EthanolRed | cds-NP_014582.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:200449-201771:+ | gene-YOL059W_FaliES1 | rna-NM_001183314.1_FaliES1 | cds-NP_014582.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000018.1:63786-65108:- | gene-YOL059W_JAY291 | rna-NM_001183314.1_JAY291 | cds-NP_014582.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:206244-207566:+ | gene-YOL059W_MUCL30387 | rna-NM_001183314.1_MUCL30387 | cds-NP_014582.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:210540-211862:+ | gene-YOL059W_MUCL30388 | rna-NM_001183314.1_MUCL30388 | cds-NP_014582.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:203118-204440:+ | gene-YOL059W_MUCL39482 | rna-NM_001183314.1_MUCL39482 | cds-NP_014582.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:218597-219919:+ | gene-YOL059W_MUCL42920 | rna-NM_001183314.1_MUCL42920 | cds-NP_014582.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:217015-218337:+ | gene-YOL059W_NCIM3186 | rna-NM_001183314.1_NCIM3186 | cds-NP_014582.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:209735-211057:+ | gene-YOL059W_NCYC1407 | rna-NM_001183314.1_NCYC1407 | cds-NP_014582.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:192740-194062:+ | gene-YOL059W_PE2H3 | rna-NM_001183314.1_PE2H3 | cds-NP_014582.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:203732-205054:+ | gene-YOL059W_PE2H4 | rna-NM_001183314.1_PE2H4 | cds-NP_014582.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:217126-218448:+ | gene-YOL059W_S288C | rna-NM_001183314.1_S288C | cds-NP_014582.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:185090-186412:+ | gene-YOL059W_SA1 | rna-NM_001183314.1_SA1 | cds-NP_014582.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:199457-200779:+ | gene-YOL059W_ThermosaccDry | rna-NM_001183314.1_ThermosaccDry | cds-NP_014582.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:200189-201511:+ | gene-YOL059W_VR1 | rna-NM_001183314.1_VR1 | cds-NP_014582.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000031.1:199097-200419:+ | gene-YOL059W_ZTW1 | rna-NM_001183314.1_ZTW1 | cds-NP_014582.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:202605-203927:+ | gene-YOL059W_Sparadoxus | rna-NM_001183314.1_Sparadoxus | cds-NP_014582.1_Sparadoxus | 94.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |