Gene name: GOT1
Reference locus (S288C): YMR292W
Gene biotype: protein_coding
Description: Homodimeric protein that is packaged into COPII vesicles; cycles between the ER and Golgi; involved in secretory transport but not directly required for aspects of transport assayed in vitro; may influence membrane composition
Top 10 interactors (score): DAL1 (0.958); TRP3 (0.927); GET3 (0.892); HUT1 (0.885); SFT2 (0.884); TRP5 (0.88); ERV14 (0.866); YPR170W-B (0.866); URA5 (0.863); URA10 (0.849); YDR193W (0.847); GET4 (0.797); PIH1 (0.788); CPA1 (0.78); URA3 (0.78); URA2 (0.78); CPA2 (0.78); YML007C-A (0.775); COG5 (0.774); USO1 (0.773)
Homologues (species, bitscore): GOLT1B (Homo sapiens, 102.8); Golt1b (Mus musculus, 101.7); golt1ba (Danio rerio, 103.2); golt1b (Xenopus tropicalis, 97.4); CG32576 (Drosophila melanogaster, 87.8); F41C3.4 (Caenorhabditis elegans, 90.5); AT1G05785 (Arabidopsis thaliana, 94.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:893844-894342:+ | gene-YMR292W_AKU4011 | rna-NM_001182800.1_AKU4011 | cds-NP_014020.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:59361-59859:- | gene-YMR292W_BG1 | rna-NM_001182800.1_BG1 | cds-NP_014020.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:839056-839554:+ | gene-YMR292W_Bruggeman | rna-NM_001182800.1_Bruggeman | cds-NP_014020.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:842337-842835:+ | gene-YMR292W_CAT1 | rna-NM_001182800.1_CAT1 | cds-NP_014020.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:826095-826593:+ | gene-YMR292W_CBS1585 | rna-NM_001182800.1_CBS1585 | cds-NP_014020.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:848413-848911:+ | gene-YMR292W_CBS436 | rna-NM_001182800.1_CBS436 | cds-NP_014020.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:937670-938168:+ | gene-YMR292W_CBS6412 | rna-NM_001182800.1_CBS6412 | cds-NP_014020.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:825214-825712:+ | gene-YMR292W_CBS6413 | rna-NM_001182800.1_CBS6413 | cds-NP_014020.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:849339-849837:+ | gene-YMR292W_CENPK1137D | rna-NM_001182800.1_CENPK1137D | cds-NP_014020.1_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:886538-887036:+ | gene-YMR292W_EthanolRed | rna-NM_001182800.1_EthanolRed | cds-NP_014020.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:832565-833063:+ | gene-YMR292W_FaliES1 | rna-NM_001182800.1_FaliES1 | cds-NP_014020.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000262.1:18672-19170:- | gene-YMR292W_JAY291 | rna-NM_001182800.1_JAY291 | cds-NP_014020.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:832880-833378:+ | gene-YMR292W_MUCL30387 | rna-NM_001182800.1_MUCL30387 | cds-NP_014020.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:842278-842767:+ | gene-YMR292W_MUCL30388 | rna-NM_001182800.1_MUCL30388 | cds-NP_014020.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:827160-827658:+ | gene-YMR292W_MUCL39482 | rna-NM_001182800.1_MUCL39482 | cds-NP_014020.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:835993-836482:+ | gene-YMR292W_MUCL42920 | rna-NM_001182800.1_MUCL42920 | cds-NP_014020.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:854749-855247:+ | gene-YMR292W_NCIM3186 | rna-NM_001182800.1_NCIM3186 | cds-NP_014020.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:826814-827312:+ | gene-YMR292W_NCYC1407 | rna-NM_001182800.1_NCYC1407 | cds-NP_014020.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:842633-843131:+ | gene-YMR292W_PE2H3 | rna-NM_001182800.1_PE2H3 | cds-NP_014020.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:838609-839107:+ | gene-YMR292W_PE2H4 | rna-NM_001182800.1_PE2H4 | cds-NP_014020.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:854795-855293:+ | gene-YMR292W_S288C | rna-NM_001182800.1_S288C | cds-NP_014020.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000036.1:32591-33089:+ | gene-YMR292W_SA1 | rna-NM_001182800.1_SA1 | cds-NP_014020.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:828733-829231:+ | gene-YMR292W_ThermosaccDry | rna-NM_001182800.1_ThermosaccDry | cds-NP_014020.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:842486-842984:+ | gene-YMR292W_VR1 | rna-NM_001182800.1_VR1 | cds-NP_014020.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:243969-244467:+ | gene-YMR292W_ZTW1 | rna-NM_001182800.1_ZTW1 | cds-NP_014020.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:847371-847869:+ | gene-YMR292W_Sparadoxus | rna-NM_001182800.1_Sparadoxus | cds-NP_014020.1_Sparadoxus | 92.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |