GNT1 (YOR320C)


Gene profile

Gene name: GNT1
Reference locus (S288C): YOR320C
Gene biotype: protein_coding

Description: Glucose N-acetyltransferase 1; N-acetylglucosaminyltransferase; capable of modification of N-linked glycans in the Golgi apparatus; Belongs to the GNT1 family

Top 10 interactors (score): ALG14 (0.85); ALG13 (0.709); MNN9 (0.694); PMT4 (0.693); LSM5 (0.657); MNN11 (0.656); ALG7 (0.637); MNT4 (0.619); LSM6 (0.608); SWP1 (0.572); MNN2 (0.568); PMT2 (0.554); GPI11 (0.527); ALG2 (0.512); HOC1 (0.503); CWH43 (0.499); PMT5 (0.497); SFA1 (0.491); OST5 (0.487); SRP68 (0.481)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:904110-905585:- gene-YOR320C_AKU4011 rna-NM_001183740.3_AKU4011 cds-NP_014965.3_AKU4011 99.6 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000123.1:306114-307589:- gene-YOR320C_BG1 rna-NM_001183740.3_BG1 cds-NP_014965.3_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:889519-890994:- gene-YOR320C_Bruggeman rna-NM_001183740.3_Bruggeman cds-NP_014965.3_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:890230-891705:- gene-YOR320C_CAT1 rna-NM_001183740.3_CAT1 cds-NP_014965.3_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:887930-889405:- gene-YOR320C_CBS1585 rna-NM_001183740.3_CBS1585 cds-NP_014965.3_CBS1585 99.6 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:885753-887228:- gene-YOR320C_CBS436 rna-NM_001183740.3_CBS436 cds-NP_014965.3_CBS436 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005341.1:883640-885115:- gene-YOR320C_CBS6412 rna-NM_001183740.3_CBS6412 cds-NP_014965.3_CBS6412 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:892768-894243:- gene-YOR320C_CBS6413 rna-NM_001183740.3_CBS6413 cds-NP_014965.3_CBS6413 99.6 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:913395-914870:- gene-YOR320C_CENPK1137D rna-NM_001183740.3_CENPK1137D cds-NP_014965.3_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:880024-881499:- gene-YOR320C_EthanolRed rna-NM_001183740.3_EthanolRed cds-NP_014965.3_EthanolRed 99.5 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:885647-887122:- gene-YOR320C_FaliES1 rna-NM_001183740.3_FaliES1 cds-NP_014965.3_FaliES1 99.5 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000078.1:116145-117620:+ gene-YOR320C_JAY291 rna-NM_001183740.3_JAY291 cds-NP_014965.3_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:893758-895233:- gene-YOR320C_MUCL30387 rna-NM_001183740.3_MUCL30387 cds-NP_014965.3_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:901771-903246:- gene-YOR320C_MUCL30388 rna-NM_001183740.3_MUCL30388 cds-NP_014965.3_MUCL30388 99.9 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:894475-895950:- gene-YOR320C_MUCL39482 rna-NM_001183740.3_MUCL39482 cds-NP_014965.3_MUCL39482 99.6 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:903940-905415:- gene-YOR320C_MUCL42920 rna-NM_001183740.3_MUCL42920 cds-NP_014965.3_MUCL42920 99.7 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:913508-914983:- gene-YOR320C_NCIM3186 rna-NM_001183740.3_NCIM3186 cds-NP_014965.3_NCIM3186 99.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:895476-896951:- gene-YOR320C_NCYC1407 rna-NM_001183740.3_NCYC1407 cds-NP_014965.3_NCYC1407 99.6 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:893695-895170:- gene-YOR320C_PE2H3 rna-NM_001183740.3_PE2H3 cds-NP_014965.3_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:910047-911522:- gene-YOR320C_PE2H4 rna-NM_001183740.3_PE2H4 cds-NP_014965.3_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:913619-915094:- gene-YOR320C_S288C rna-NM_001183740.3_S288C cds-NP_014965.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000016.1:23946-25421:- gene-YOR320C_SA1 rna-NM_001183740.3_SA1 cds-NP_014965.3_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:884830-886305:- gene-YOR320C_ThermosaccDry rna-NM_001183740.3_ThermosaccDry cds-NP_014965.3_ThermosaccDry 99.5 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:948115-949590:- gene-YOR320C_VR1 rna-NM_001183740.3_VR1 cds-NP_014965.3_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000032.1:617703-619178:- gene-YOR320C_ZTW1 rna-NM_001183740.3_ZTW1 cds-NP_014965.3_ZTW1 99.6 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:892045-893520:- gene-YOR320C_Sparadoxus rna-NM_001183740.3_Sparadoxus cds-NP_014965.3_Sparadoxus 87.8 99.9 Verified 1 1 1 False True False False False

Additional files