Gene name: GNP1
Reference locus (S288C): YDR508C
Gene biotype: protein_coding
Description: High-affinity glutamine permease; also transports Leu, Ser, Thr, Cys, Met and Asn; expression is fully dependent on Grr1p and modulated by the Ssy1p-Ptr3p-Ssy5p (SPS) sensor of extracellular amino acids; GNP1 has a paralog, AGP1, that arose from the whole genome duplication
Top 10 interactors (score): AGP1 (0.999); MUP1 (0.741); PTR2 (0.717); PTR3 (0.711); SSY5 (0.69); CCL1 (0.688); KAR2 (0.683); MEP1 (0.667); AVT5 (0.64); BUL1 (0.605); YBR287W (0.602); MEP3 (0.58); MEP2 (0.576); SSY1 (0.57); YCT1 (0.544); STP2 (0.526); STP1 (0.526); BAP3 (0.51); FCY2 (0.5); SHR3 (0.5)
Homologues (species, bitscore): SLC7A8 (Homo sapiens, 54.3); Slc7a5 (Mus musculus, 56.6); slc7a8a (Danio rerio, 60.5); slc7a5 (Xenopus tropicalis, 65.1); CG7255 (Drosophila melanogaster, 52.0); aat-1 (Caenorhabditis elegans, 61.6); At5g36940 (Arabidopsis thaliana, 53.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1406462-1408453:- | gene-YDR508C_AKU4011 | rna-NM_001180816.1_AKU4011 | cds-NP_010796.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000073.1:48116-50107:- | gene-YDR508C_BG1 | rna-NM_001180816.1_BG1 | cds-NP_010796.1_BG1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1437781-1439772:- | gene-YDR508C_Bruggeman | rna-NM_001180816.1_Bruggeman | cds-NP_010796.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1414956-1416947:- | gene-YDR508C_CAT1 | rna-NM_001180816.1_CAT1 | cds-NP_010796.1_CAT1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1401197-1403188:- | gene-YDR508C_CBS1585 | rna-NM_001180816.1_CBS1585 | cds-NP_010796.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1420426-1422417:- | gene-YDR508C_CBS436 | rna-NM_001180816.1_CBS436 | cds-NP_010796.1_CBS436 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1396347-1398338:- | gene-YDR508C_CBS6412 | rna-NM_001180816.1_CBS6412 | cds-NP_010796.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1419851-1421842:- | gene-YDR508C_CBS6413 | rna-NM_001180816.1_CBS6413 | cds-NP_010796.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1465146-1467137:- | gene-YDR508C_CENPK1137D | rna-NM_001180816.1_CENPK1137D | cds-NP_010796.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1409730-1411721:- | gene-YDR508C_EthanolRed | rna-NM_001180816.1_EthanolRed | cds-NP_010796.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1413282-1415273:- | gene-YDR508C_FaliES1 | rna-NM_001180816.1_FaliES1 | cds-NP_010796.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000026.1:111659-113650:- | gene-YDR508C_JAY291 | rna-NM_001180816.1_JAY291 | cds-NP_010796.1_JAY291 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1420871-1422862:- | gene-YDR508C_MUCL30387 | rna-NM_001180816.1_MUCL30387 | cds-NP_010796.1_MUCL30387 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1402304-1404295:- | gene-YDR508C_MUCL30388 | rna-NM_001180816.1_MUCL30388 | cds-NP_010796.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1392686-1394677:- | gene-YDR508C_MUCL39482 | rna-NM_001180816.1_MUCL39482 | cds-NP_010796.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1335348-1337339:- | gene-YDR508C_MUCL42920 | rna-NM_001180816.1_MUCL42920 | cds-NP_010796.1_MUCL42920 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1466376-1468367:- | gene-YDR508C_NCIM3186 | rna-NM_001180816.1_NCIM3186 | cds-NP_010796.1_NCIM3186 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1405976-1407967:- | gene-YDR508C_NCYC1407 | rna-NM_001180816.1_NCYC1407 | cds-NP_010796.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1416926-1418917:- | gene-YDR508C_PE2H3 | rna-NM_001180816.1_PE2H3 | cds-NP_010796.1_PE2H3 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1422392-1424383:- | gene-YDR508C_PE2H4 | rna-NM_001180816.1_PE2H4 | cds-NP_010796.1_PE2H4 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1466453-1468444:- | gene-YDR508C_S288C | rna-NM_001180816.1_S288C | cds-NP_010796.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:148671-150662:+ | gene-YDR508C_SA1 | rna-NM_001180816.1_SA1 | cds-NP_010796.1_SA1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1417504-1419495:- | gene-YDR508C_ThermosaccDry | rna-NM_001180816.1_ThermosaccDry | cds-NP_010796.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1433297-1435288:- | gene-YDR508C_VR1 | rna-NM_001180816.1_VR1 | cds-NP_010796.1_VR1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:460165-462156:- | gene-YDR508C_ZTW1 | rna-NM_001180816.1_ZTW1 | cds-NP_010796.1_ZTW1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1426399-1428390:- | gene-YDR508C_Sparadoxus | rna-NM_001180816.1_Sparadoxus | cds-NP_010796.1_Sparadoxus | 91.0 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |