Gene name: GND1
Reference locus (S288C): YHR183W
Gene biotype: protein_coding
Description: 6-phosphogluconate dehydrogenase (decarboxylating); catalyzes an NADPH regenerating reaction in the pentose phosphate pathway; required for growth on D-glucono-delta-lactone and adaptation to oxidative stress; GND1 has a paralog, GND2, that arose from the whole genome duplication
Top 10 interactors (score): RPE1 (0.999); ZWF1 (0.999); SOL3 (0.996); YDR248C (0.994); TKL1 (0.992); SOL4 (0.99); TAL1 (0.988); GND2 (0.983); PGK1 (0.983); SOL1 (0.979); RKI1 (0.973); NQM1 (0.97); SOL2 (0.954); TKL2 (0.947); PGI1 (0.923); GLR1 (0.873); TRR2 (0.817); TRR1 (0.816); ALD6 (0.794); GDH1 (0.789)
Homologues (species, bitscore): PGD (Homo sapiens, 664.1); Pgd (Mus musculus, 668.3); pgd (Danio rerio, 657.5); pgd (Xenopus tropicalis, 572.8); Pgd (Drosophila melanogaster, 659.4); T25B9.9 (Caenorhabditis elegans, 649.4); AT5G41670 (Arabidopsis thaliana, 464.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:458048-459517:+ | gene-YHR183W_AKU4011 | rna-NM_001179314.3_AKU4011 | cds-NP_012053.3_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:58233-59702:- | gene-YHR183W_BG1 | rna-NM_001179314.3_BG1 | cds-NP_012053.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:465297-466766:+ | gene-YHR183W_Bruggeman | rna-NM_001179314.3_Bruggeman | cds-NP_012053.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:461561-463030:+ | gene-YHR183W_CAT1 | rna-NM_001179314.3_CAT1 | cds-NP_012053.3_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:457500-458969:+ | gene-YHR183W_CBS1585 | rna-NM_001179314.3_CBS1585 | cds-NP_012053.3_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:454949-456418:+ | gene-YHR183W_CBS436 | rna-NM_001179314.3_CBS436 | cds-NP_012053.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:457599-459068:+ | gene-YHR183W_CBS6412 | rna-NM_001179314.3_CBS6412 | cds-NP_012053.3_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:458890-460359:+ | gene-YHR183W_CBS6413 | rna-NM_001179314.3_CBS6413 | cds-NP_012053.3_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:464148-465617:+ | gene-YHR183W_CENPK1137D | rna-NM_001179314.3_CENPK1137D | cds-NP_012053.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:516593-518062:+ | gene-YHR183W_EthanolRed | rna-NM_001179314.3_EthanolRed | cds-NP_012053.3_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:459037-460506:+ | gene-YHR183W_FaliES1 | rna-NM_001179314.3_FaliES1 | cds-NP_012053.3_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000147.1:4187-5656:+ | gene-YHR183W_JAY291 | rna-NM_001179314.3_JAY291 | cds-NP_012053.3_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:466623-468092:+ | gene-YHR183W_MUCL30387 | rna-NM_001179314.3_MUCL30387 | cds-NP_012053.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:466046-467515:+ | gene-YHR183W_MUCL30388 | rna-NM_001179314.3_MUCL30388 | cds-NP_012053.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:457411-458880:+ | gene-YHR183W_MUCL39482 | rna-NM_001179314.3_MUCL39482 | cds-NP_012053.3_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:465353-466822:+ | gene-YHR183W_MUCL42920 | rna-NM_001179314.3_MUCL42920 | cds-NP_012053.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:470842-472311:+ | gene-YHR183W_NCIM3186 | rna-NM_001179314.3_NCIM3186 | cds-NP_012053.3_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:459872-461341:+ | gene-YHR183W_NCYC1407 | rna-NM_001179314.3_NCYC1407 | cds-NP_012053.3_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:459025-460494:+ | gene-YHR183W_PE2H3 | rna-NM_001179314.3_PE2H3 | cds-NP_012053.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:466452-467921:+ | gene-YHR183W_PE2H4 | rna-NM_001179314.3_PE2H4 | cds-NP_012053.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:470960-472429:+ | gene-YHR183W_S288C | rna-NM_001179314.3_S288C | cds-NP_012053.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000079.1:19116-20585:+ | gene-YHR183W_SA1 | rna-NM_001179314.3_SA1 | cds-NP_012053.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:460120-461589:+ | gene-YHR183W_ThermosaccDry | rna-NM_001179314.3_ThermosaccDry | cds-NP_012053.3_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:469326-470795:+ | gene-YHR183W_VR1 | rna-NM_001179314.3_VR1 | cds-NP_012053.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:450358-451827:+ | gene-YHR183W_ZTW1 | rna-NM_001179314.3_ZTW1 | cds-NP_012053.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:457050-458519:+ | gene-YHR183W_Sparadoxus | rna-NM_001179314.3_Sparadoxus | cds-NP_012053.3_Sparadoxus | 96.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |