Gene name: GMC1
Reference locus (S288C): YDR506C
Gene biotype: protein_coding
Description: Putative multicopper oxidase GMC1; Protein involved in meiotic progression; mutants are delayed in meiotic nuclear division and are defective in synaptonemal complex assembly; possible membrane-localized protein; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively
Top 10 interactors (score): GMC2 (0.892); YFL012W (0.711); FTR1 (0.699); ATX1 (0.582); SAM1 (0.575); SAM2 (0.571); FTH1 (0.553); SPO11 (0.514); YMR181C (0.497); LYS2 (0.491); YFH1 (0.474); RCR1 (0.45); CCC2 (0.431); PCA1 (0.431); OSM1 (0.402)
Homologues (species, bitscore): CG32557 (Drosophila melanogaster, 102.8); F21D5.3 (Caenorhabditis elegans, 76.3); AT5G21105 (Arabidopsis thaliana, 112.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1399713-1401539:- | gene-YDR506C_AKU4011 | rna-NM_001180814.3_AKU4011 | cds-NP_010794.3_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000073.1:41373-43199:- | gene-YDR506C_BG1 | rna-NM_001180814.3_BG1 | cds-NP_010794.3_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1431034-1432860:- | gene-YDR506C_Bruggeman | rna-NM_001180814.3_Bruggeman | cds-NP_010794.3_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1408213-1410039:- | gene-YDR506C_CAT1 | rna-NM_001180814.3_CAT1 | cds-NP_010794.3_CAT1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1393955-1395781:- | gene-YDR506C_CBS1585 | rna-NM_001180814.3_CBS1585 | cds-NP_010794.3_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1413363-1415189:- | gene-YDR506C_CBS436 | rna-NM_001180814.3_CBS436 | cds-NP_010794.3_CBS436 | 98.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1389597-1391423:- | gene-YDR506C_CBS6412 | rna-NM_001180814.3_CBS6412 | cds-NP_010794.3_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1412612-1414438:- | gene-YDR506C_CBS6413 | rna-NM_001180814.3_CBS6413 | cds-NP_010794.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1458422-1460248:- | gene-YDR506C_CENPK1137D | rna-NM_001180814.3_CENPK1137D | cds-NP_010794.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1403002-1404828:- | gene-YDR506C_EthanolRed | rna-NM_001180814.3_EthanolRed | cds-NP_010794.3_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1406555-1408381:- | gene-YDR506C_FaliES1 | rna-NM_001180814.3_FaliES1 | cds-NP_010794.3_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000026.1:104916-106742:- | gene-YDR506C_JAY291 | rna-NM_001180814.3_JAY291 | cds-NP_010794.3_JAY291 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1413559-1415385:- | gene-YDR506C_MUCL30387 | rna-NM_001180814.3_MUCL30387 | cds-NP_010794.3_MUCL30387 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1395552-1397378:- | gene-YDR506C_MUCL30388 | rna-NM_001180814.3_MUCL30388 | cds-NP_010794.3_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1385440-1387266:- | gene-YDR506C_MUCL39482 | rna-NM_001180814.3_MUCL39482 | cds-NP_010794.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1328285-1330111:- | gene-YDR506C_MUCL42920 | rna-NM_001180814.3_MUCL42920 | cds-NP_010794.3_MUCL42920 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1459651-1461477:- | gene-YDR506C_NCIM3186 | rna-NM_001180814.3_NCIM3186 | cds-NP_010794.3_NCIM3186 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1399226-1401052:- | gene-YDR506C_NCYC1407 | rna-NM_001180814.3_NCYC1407 | cds-NP_010794.3_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1410183-1412009:- | gene-YDR506C_PE2H3 | rna-NM_001180814.3_PE2H3 | cds-NP_010794.3_PE2H3 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1415649-1417475:- | gene-YDR506C_PE2H4 | rna-NM_001180814.3_PE2H4 | cds-NP_010794.3_PE2H4 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1459728-1461554:- | gene-YDR506C_S288C | rna-NM_001180814.3_S288C | cds-NP_010794.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:155579-157405:+ | gene-YDR506C_SA1 | rna-NM_001180814.3_SA1 | cds-NP_010794.3_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1410777-1412603:- | gene-YDR506C_ThermosaccDry | rna-NM_001180814.3_ThermosaccDry | cds-NP_010794.3_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1426554-1428380:- | gene-YDR506C_VR1 | rna-NM_001180814.3_VR1 | cds-NP_010794.3_VR1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:453445-455271:- | gene-YDR506C_ZTW1 | rna-NM_001180814.3_ZTW1 | cds-NP_010794.3_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1413639-1415468:- | gene-YDR506C_Sparadoxus | rna-NM_001180814.3_Sparadoxus | cds-NP_010794.3_Sparadoxus | 86.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |