Gene name: GLY1
Reference locus (S288C): YEL046C
Gene biotype: protein_coding
Description: Low specificity L-threonine aldolase; Threonine aldolase; catalyzes the cleavage of L-allo-threonine and L-threonine to glycine; involved in glycine biosynthesis
Top 10 interactors (score): AGX1 (0.998); SHM2 (0.997); SHM1 (0.975); GCV2 (0.97); ILV1 (0.967); CHA1 (0.95); THR4 (0.95); HEM1 (0.935); YMR226C (0.9); YEL045C (0.895); GCV3 (0.853); HOM2 (0.83); THR1 (0.815); GCV1 (0.811); ALT2 (0.79); ALT1 (0.766); AAT2 (0.733); LPD1 (0.7); ILV2 (0.693); NMT1 (0.683)
Homologues (species, bitscore): Tha1 (Mus musculus, 138.7); tha1 (Danio rerio, 149.4); tha1p (Xenopus tropicalis, 169.5); CG10184 (Drosophila melanogaster, 154.5); R102.4 (Caenorhabditis elegans, 169.1); THA2 (Arabidopsis thaliana, 181.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:61689-62852:- | gene-YEL046C_AKU4011 | rna-NM_001178861.1_AKU4011 | cds-NP_010868.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000075.1:17696-18859:+ | gene-YEL046C_BG1 | rna-NM_001178861.1_BG1 | cds-NP_010868.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:65205-66368:- | gene-YEL046C_Bruggeman | rna-NM_001178861.1_Bruggeman | cds-NP_010868.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:63622-64785:- | gene-YEL046C_CAT1 | rna-NM_001178861.1_CAT1 | cds-NP_010868.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:61635-62798:- | gene-YEL046C_CBS1585 | rna-NM_001178861.1_CBS1585 | cds-NP_010868.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:63266-64429:- | gene-YEL046C_CBS436 | rna-NM_001178861.1_CBS436 | cds-NP_010868.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:61887-63050:- | gene-YEL046C_CBS6412 | rna-NM_001178861.1_CBS6412 | cds-NP_010868.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:66527-67690:- | gene-YEL046C_CBS6413 | rna-NM_001178861.1_CBS6413 | cds-NP_010868.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:65481-66644:- | gene-YEL046C_CENPK1137D | rna-NM_001178861.1_CENPK1137D | cds-NP_010868.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:61442-62605:- | gene-YEL046C_EthanolRed | rna-NM_001178861.1_EthanolRed | cds-NP_010868.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:61705-62868:- | gene-YEL046C_FaliES1 | rna-NM_001178861.1_FaliES1 | cds-NP_010868.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000022.1:16947-18110:+ | gene-YEL046C_JAY291 | rna-NM_001178861.1_JAY291 | cds-NP_010868.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:65887-67050:- | gene-YEL046C_MUCL30387 | rna-NM_001178861.1_MUCL30387 | cds-NP_010868.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:61747-62910:- | gene-YEL046C_MUCL30388 | rna-NM_001178861.1_MUCL30388 | cds-NP_010868.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:61004-62167:- | gene-YEL046C_MUCL39482 | rna-NM_001178861.1_MUCL39482 | cds-NP_010868.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:65637-66800:- | gene-YEL046C_MUCL42920 | rna-NM_001178861.1_MUCL42920 | cds-NP_010868.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:67628-68791:- | gene-YEL046C_NCIM3186 | rna-NM_001178861.1_NCIM3186 | cds-NP_010868.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:66098-67261:- | gene-YEL046C_NCYC1407 | rna-NM_001178861.1_NCYC1407 | cds-NP_010868.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:70123-71286:- | gene-YEL046C_PE2H3 | rna-NM_001178861.1_PE2H3 | cds-NP_010868.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:66038-67201:- | gene-YEL046C_PE2H4 | rna-NM_001178861.1_PE2H4 | cds-NP_010868.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:67629-68792:- | gene-YEL046C_S288C | rna-NM_001178861.1_S288C | cds-NP_010868.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000053.1:17792-18955:+ | gene-YEL046C_SA1 | rna-NM_001178861.1_SA1 | cds-NP_010868.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:62104-63267:- | gene-YEL046C_ThermosaccDry | rna-NM_001178861.1_ThermosaccDry | cds-NP_010868.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:61326-62489:- | gene-YEL046C_VR1 | rna-NM_001178861.1_VR1 | cds-NP_010868.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:61037-62200:- | gene-YEL046C_ZTW1 | rna-NM_001178861.1_ZTW1 | cds-NP_010868.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:63704-64867:- | gene-YEL046C_Sparadoxus | rna-NM_001178861.1_Sparadoxus | cds-NP_010868.1_Sparadoxus | 92.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |