Gene name: GLO3
Reference locus (S288C): YER122C
Gene biotype: protein_coding
Description: ADP-ribosylation factor GTPase activating protein (ARF GAP); involved in ER-Golgi transport; shares functional similarity with Gcs1p
Top 10 interactors (score): ARF2 (0.999); ARF1 (0.999); SPS18 (0.997); SEC21 (0.995); COP1 (0.995); GCS1 (0.994); ARL1 (0.988); SEC26 (0.98); SEC22 (0.967); GEA2 (0.961); SEC27 (0.958); BET1 (0.95); ERD2 (0.943); ARF3 (0.929); GEA1 (0.908); RHO1 (0.904); BOS1 (0.875); RET2 (0.857); SEC7 (0.82); YPT1 (0.807)
Homologues (species, bitscore): ARFGAP2 (Homo sapiens, 124.4); Arfgap2 (Mus musculus, 118.2); arfgap3 (Danio rerio, 117.9); arfgap2 (Xenopus tropicalis, 112.1); ArfGAP3 (Drosophila melanogaster, 127.1); F07F6.4 (Caenorhabditis elegans, 119.4); AGD9 (Arabidopsis thaliana, 135.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:396747-398228:- | gene-YER122C_AKU4011 | rna-NM_001179012.1_AKU4011 | cds-NP_011048.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:27394-28875:+ | gene-YER122C_BG1 | rna-NM_001179012.1_BG1 | cds-NP_011048.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:407216-408697:- | gene-YER122C_Bruggeman | rna-NM_001179012.1_Bruggeman | cds-NP_011048.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:402459-403940:- | gene-YER122C_CAT1 | rna-NM_001179012.1_CAT1 | cds-NP_011048.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:396142-397623:- | gene-YER122C_CBS1585 | rna-NM_001179012.1_CBS1585 | cds-NP_011048.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:398848-400329:- | gene-YER122C_CBS436 | rna-NM_001179012.1_CBS436 | cds-NP_011048.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:395220-396701:- | gene-YER122C_CBS6412 | rna-NM_001179012.1_CBS6412 | cds-NP_011048.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:402064-403545:- | gene-YER122C_CBS6413 | rna-NM_001179012.1_CBS6413 | cds-NP_011048.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:400606-402123:- | gene-YER122C_CENPK1137D | rna-NM_001179012.1_CENPK1137D | cds-NP_011048.1_CENPK1137D | 93.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:396596-398077:- | gene-YER122C_EthanolRed | rna-NM_001179012.1_EthanolRed | cds-NP_011048.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:397077-398558:- | gene-YER122C_FaliES1 | rna-NM_001179012.1_FaliES1 | cds-NP_011048.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000028.1:5296-6777:- | gene-YER122C_JAY291 | rna-NM_001179012.1_JAY291 | cds-NP_011048.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:404164-405645:- | gene-YER122C_MUCL30387 | rna-NM_001179012.1_MUCL30387 | cds-NP_011048.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:399110-400591:- | gene-YER122C_MUCL30388 | rna-NM_001179012.1_MUCL30388 | cds-NP_011048.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:395167-396648:- | gene-YER122C_MUCL39482 | rna-NM_001179012.1_MUCL39482 | cds-NP_011048.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:403656-405137:- | gene-YER122C_MUCL42920 | rna-NM_001179012.1_MUCL42920 | cds-NP_011048.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:402870-404351:- | gene-YER122C_NCIM3186 | rna-NM_001179012.1_NCIM3186 | cds-NP_011048.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:400700-402181:- | gene-YER122C_NCYC1407 | rna-NM_001179012.1_NCYC1407 | cds-NP_011048.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:411245-412726:- | gene-YER122C_PE2H3 | rna-NM_001179012.1_PE2H3 | cds-NP_011048.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:401186-402667:- | gene-YER122C_PE2H4 | rna-NM_001179012.1_PE2H4 | cds-NP_011048.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:402871-404352:- | gene-YER122C_S288C | rna-NM_001179012.1_S288C | cds-NP_011048.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000023.1:112477-113958:- | gene-YER122C_SA1 | rna-NM_001179012.1_SA1 | cds-NP_011048.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:397875-399356:- | gene-YER122C_ThermosaccDry | rna-NM_001179012.1_ThermosaccDry | cds-NP_011048.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:398929-400410:- | gene-YER122C_VR1 | rna-NM_001179012.1_VR1 | cds-NP_011048.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:395009-396490:- | gene-YER122C_ZTW1 | rna-NM_001179012.1_ZTW1 | cds-NP_011048.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:398923-400410:- | gene-YER122C_Sparadoxus | rna-NM_001179012.1_Sparadoxus | cds-NP_011048.1_Sparadoxus | 91.2 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |