Gene name: GLN4
Reference locus (S288C): YOR168W
Gene biotype: protein_coding
Description: Glutamine--tRNA ligase; Glutamine tRNA synthetase; monomeric class I tRNA synthetase that catalyzes the specific glutaminylation of tRNA(Gln); N-terminal domain proposed to be involved in enzyme-tRNA interactions; Belongs to the class-I aminoacyl-tRNA synthetase family
Top 10 interactors (score): CDC60 (0.999); ILS1 (0.999); MES1 (0.999); KRS1 (0.999); ARC1 (0.999); VAS1 (0.998); YHR020W (0.998); DPS1 (0.997); GUS1 (0.995); TYS1 (0.989); MSK1 (0.988); ALA1 (0.986); SLM5 (0.978); PET112 (0.975); MSM1 (0.972); YDR341C (0.971); HER2 (0.965); NAM2 (0.965); HTS1 (0.964); MSR1 (0.963)
Homologues (species, bitscore): QARS (Homo sapiens, 532.3); Qars (Mus musculus, 545.8); qars (Danio rerio, 562.8); qars (Xenopus tropicalis, 552.0); Aats-gln (Drosophila melanogaster, 533.5); qars-1 (Caenorhabditis elegans, 538.5); OVA9 (Arabidopsis thaliana, 511.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:646940-649369:+ | gene-YOR168W_AKU4011 | rna-NM_001183587.3_AKU4011 | cds-NP_014811.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:48696-51125:+ | gene-YOR168W_BG1 | rna-NM_001183587.3_BG1 | cds-NP_014811.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:631015-633444:+ | gene-YOR168W_Bruggeman | rna-NM_001183587.3_Bruggeman | cds-NP_014811.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:631033-633462:+ | gene-YOR168W_CAT1 | rna-NM_001183587.3_CAT1 | cds-NP_014811.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:629435-631864:+ | gene-YOR168W_CBS1585 | rna-NM_001183587.3_CBS1585 | cds-NP_014811.3_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:627731-630160:+ | gene-YOR168W_CBS436 | rna-NM_001183587.3_CBS436 | cds-NP_014811.3_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:627047-629476:+ | gene-YOR168W_CBS6412 | rna-NM_001183587.3_CBS6412 | cds-NP_014811.3_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:635728-638157:+ | gene-YOR168W_CBS6413 | rna-NM_001183587.3_CBS6413 | cds-NP_014811.3_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:649062-651491:+ | gene-YOR168W_CENPK1137D | rna-NM_001183587.3_CENPK1137D | cds-NP_014811.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:623144-625573:+ | gene-YOR168W_EthanolRed | rna-NM_001183587.3_EthanolRed | cds-NP_014811.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:627997-630426:+ | gene-YOR168W_FaliES1 | rna-NM_001183587.3_FaliES1 | cds-NP_014811.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000070.1:13114-15543:- | gene-YOR168W_JAY291 | rna-NM_001183587.3_JAY291 | cds-NP_014811.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:635822-638251:+ | gene-YOR168W_MUCL30387 | rna-NM_001183587.3_MUCL30387 | cds-NP_014811.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:642584-645013:+ | gene-YOR168W_MUCL30388 | rna-NM_001183587.3_MUCL30388 | cds-NP_014811.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:637276-639705:+ | gene-YOR168W_MUCL39482 | rna-NM_001183587.3_MUCL39482 | cds-NP_014811.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:646699-649128:+ | gene-YOR168W_MUCL42920 | rna-NM_001183587.3_MUCL42920 | cds-NP_014811.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:649192-651621:+ | gene-YOR168W_NCIM3186 | rna-NM_001183587.3_NCIM3186 | cds-NP_014811.3_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:637362-639791:+ | gene-YOR168W_NCYC1407 | rna-NM_001183587.3_NCYC1407 | cds-NP_014811.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:635876-638305:+ | gene-YOR168W_PE2H3 | rna-NM_001183587.3_PE2H3 | cds-NP_014811.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:646253-648682:+ | gene-YOR168W_PE2H4 | rna-NM_001183587.3_PE2H4 | cds-NP_014811.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:649303-651732:+ | gene-YOR168W_S288C | rna-NM_001183587.3_S288C | cds-NP_014811.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:65861-68290:+ | gene-YOR168W_SA1 | rna-NM_001183587.3_SA1 | cds-NP_014811.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:627180-629609:+ | gene-YOR168W_ThermosaccDry | rna-NM_001183587.3_ThermosaccDry | cds-NP_014811.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:690878-693307:+ | gene-YOR168W_VR1 | rna-NM_001183587.3_VR1 | cds-NP_014811.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:360629-363058:+ | gene-YOR168W_ZTW1 | rna-NM_001183587.3_ZTW1 | cds-NP_014811.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:632250-634679:+ | gene-YOR168W_Sparadoxus | rna-NM_001183587.3_Sparadoxus | cds-NP_014811.3_Sparadoxus | 91.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |