Gene name: GLG1
Reference locus (S288C): YKR058W
Gene biotype: protein_coding
Description: Glycogenin-1; Glycogenin glucosyltransferase; self-glucosylating initiator of glycogen synthesis, also glucosylates n-dodecyl-beta-D-maltoside; SWAT-GFP and mCherry fusion proteins localize to the cell periphery and vacuole respectively; similar to mammalian glycogenin; GLG1 has a paralog, GLG2, that arose from the whole genome duplication
Top 10 interactors (score): GSY1 (0.999); GSY2 (0.999); GLC3 (0.999); UGP1 (0.964); YHL012W (0.924); GLG2 (0.872); GPH1 (0.859); GAC1 (0.842); GDB1 (0.815); TPS1 (0.756); GIP2 (0.753); TPS2 (0.717); TSL1 (0.708); PIG2 (0.685); TPS3 (0.662); FKS3 (0.659); GSC2 (0.659); FKS1 (0.659); PGM2 (0.647); RGI1 (0.639)
Homologues (species, bitscore): GYG2 (Homo sapiens, 124.0); Gyg (Mus musculus, 117.5); gyg2 (Danio rerio, 115.5); gyg2 (Xenopus tropicalis, 116.7); Gyg (Drosophila melanogaster, 134.4); gyg-1 (Caenorhabditis elegans, 123.6); PGSIP2 (Arabidopsis thaliana, 60.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:538066-539916:+ | gene-YKR058W_AKU4011 | rna-NM_001179848.1_AKU4011 | cds-NP_012984.2_AKU4011 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:103610-105460:- | gene-YKR058W_BG1 | rna-NM_001179848.1_BG1 | cds-NP_012984.2_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:560242-562092:+ | gene-YKR058W_Bruggeman | rna-NM_001179848.1_Bruggeman | cds-NP_012984.2_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:556667-558517:+ | gene-YKR058W_CAT1 | rna-NM_001179848.1_CAT1 | cds-NP_012984.2_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:550806-552656:+ | gene-YKR058W_CBS1585 | rna-NM_001179848.1_CBS1585 | cds-NP_012984.2_CBS1585 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:549637-551487:+ | gene-YKR058W_CBS436 | rna-NM_001179848.1_CBS436 | cds-NP_012984.2_CBS436 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:534984-536834:+ | gene-YKR058W_CBS6412 | rna-NM_001179848.1_CBS6412 | cds-NP_012984.2_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:550626-552476:+ | gene-YKR058W_CBS6413 | rna-NM_001179848.1_CBS6413 | cds-NP_012984.2_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:552426-554276:+ | gene-YKR058W_CENPK1137D | rna-NM_001179848.1_CENPK1137D | cds-NP_012984.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:548387-550237:+ | gene-YKR058W_EthanolRed | rna-NM_001179848.1_EthanolRed | cds-NP_012984.2_EthanolRed | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:551524-553374:+ | gene-YKR058W_FaliES1 | rna-NM_001179848.1_FaliES1 | cds-NP_012984.2_FaliES1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000077.1:427-2277:- | gene-YKR058W_JAY291 | rna-NM_001179848.1_JAY291 | cds-NP_012984.2_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:560640-562490:+ | gene-YKR058W_MUCL30387 | rna-NM_001179848.1_MUCL30387 | cds-NP_012984.2_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:555003-556853:+ | gene-YKR058W_MUCL30388 | rna-NM_001179848.1_MUCL30388 | cds-NP_012984.2_MUCL30388 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:550134-551984:+ | gene-YKR058W_MUCL39482 | rna-NM_001179848.1_MUCL39482 | cds-NP_012984.2_MUCL39482 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:556156-558006:+ | gene-YKR058W_MUCL42920 | rna-NM_001179848.1_MUCL42920 | cds-NP_012984.2_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:552759-554609:+ | gene-YKR058W_NCIM3186 | rna-NM_001179848.1_NCIM3186 | cds-NP_012984.2_NCIM3186 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:550348-552198:+ | gene-YKR058W_NCYC1407 | rna-NM_001179848.1_NCYC1407 | cds-NP_012984.2_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:575714-577564:+ | gene-YKR058W_PE2H3 | rna-NM_001179848.1_PE2H3 | cds-NP_012984.2_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:560109-561959:+ | gene-YKR058W_PE2H4 | rna-NM_001179848.1_PE2H4 | cds-NP_012984.2_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:552770-554620:+ | gene-YKR058W_S288C | rna-NM_001179848.1_S288C | cds-NP_012984.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000093.1:35870-37720:+ | gene-YKR058W_SA1 | rna-NM_001179848.1_SA1 | cds-NP_012984.2_SA1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:550763-552613:+ | gene-YKR058W_ThermosaccDry | rna-NM_001179848.1_ThermosaccDry | cds-NP_012984.2_ThermosaccDry | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:550782-552632:+ | gene-YKR058W_VR1 | rna-NM_001179848.1_VR1 | cds-NP_012984.2_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:548752-550602:+ | gene-YKR058W_ZTW1 | rna-NM_001179848.1_ZTW1 | cds-NP_012984.2_ZTW1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:574135-575961:+ | gene-YKR058W_Sparadoxus | rna-NM_001179848.1_Sparadoxus | cds-NP_012984.2_Sparadoxus | 82.8 | 98.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |