Gene name: GIP4
Reference locus (S288C): YAL031C
Gene biotype: protein_coding
Description: GLC7-interacting protein 4; Cytoplasmic protein that regulates protein phosphatase 1 Glc7p; protein overexpression relocalizes Glc7p from the nucleus and prevents chromosome segregation; potential Cdc28p substrate
Top 10 interactors (score): GLC7 (0.77); GIP3 (0.745); FUN19 (0.724); POP5 (0.713); SOL2 (0.673); PRP45 (0.599); PEX31 (0.574); SOL1 (0.572); ZEO1 (0.57); HOC1 (0.567); IPL1 (0.553); SDS22 (0.499); BUD14 (0.485); FUS1 (0.459); PFS2 (0.4); BOL3 (0.4)
Homologues (species, bitscore): MUC5AC (Homo sapiens, 56.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005295.1:69875-72157:- | gene-YAL031C_AKU4011 | rna-NM_001178176.1_AKU4011 | cds-NP_009371.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000070.1:57003-59285:- | gene-YAL031C_BG1 | rna-NM_001178176.1_BG1 | cds-NP_009371.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005503.1:84755-87037:- | gene-YAL031C_Bruggeman | rna-NM_001178176.1_Bruggeman | cds-NP_009371.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005519.1:71101-73383:- | gene-YAL031C_CAT1 | rna-NM_001178176.1_CAT1 | cds-NP_009371.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005359.1:82892-85174:- | gene-YAL031C_CBS1585 | rna-NM_001178176.1_CBS1585 | cds-NP_009371.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005343.1:83142-85424:- | gene-YAL031C_CBS436 | rna-NM_001178176.1_CBS436 | cds-NP_009371.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005327.1:69038-71320:- | gene-YAL031C_CBS6412 | rna-NM_001178176.1_CBS6412 | cds-NP_009371.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005311.1:81157-83439:- | gene-YAL031C_CBS6413 | rna-NM_001178176.1_CBS6413 | cds-NP_009371.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001522.1:84839-87121:- | gene-YAL031C_CENPK1137D | rna-NM_001178176.1_CENPK1137D | cds-NP_009371.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005471.1:71296-73578:- | gene-YAL031C_EthanolRed | rna-NM_001178176.1_EthanolRed | cds-NP_009371.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005535.1:85919-88201:- | gene-YAL031C_FaliES1 | rna-NM_001178176.1_FaliES1 | cds-NP_009371.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000084.1:57193-59475:- | gene-YAL031C_JAY291 | rna-NM_001178176.1_JAY291 | cds-NP_009371.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005407.1:85847-88129:- | gene-YAL031C_MUCL30387 | rna-NM_001178176.1_MUCL30387 | cds-NP_009371.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005439.1:82394-84676:- | gene-YAL031C_MUCL30388 | rna-NM_001178176.1_MUCL30388 | cds-NP_009371.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005279.1:81678-83960:- | gene-YAL031C_MUCL39482 | rna-NM_001178176.1_MUCL39482 | cds-NP_009371.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005423.1:84050-86332:- | gene-YAL031C_MUCL42920 | rna-NM_001178176.1_MUCL42920 | cds-NP_009371.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011810.1:84626-86908:- | gene-YAL031C_NCIM3186 | rna-NM_001178176.1_NCIM3186 | cds-NP_009371.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005263.1:69557-71839:- | gene-YAL031C_NCYC1407 | rna-NM_001178176.1_NCYC1407 | cds-NP_009371.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994140.1:71463-73745:- | gene-YAL031C_PE2H3 | rna-NM_001178176.1_PE2H3 | cds-NP_009371.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999872.1:71182-73464:- | gene-YAL031C_PE2H4 | rna-NM_001178176.1_PE2H4 | cds-NP_009371.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001133.9:84749-87031:- | gene-YAL031C_S288C | rna-NM_001178176.1_S288C | cds-NP_009371.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000059.1:13873-16155:- | gene-YAL031C_SA1 | rna-NM_001178176.1_SA1 | cds-NP_009371.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005487.1:85437-87719:- | gene-YAL031C_ThermosaccDry | rna-NM_001178176.1_ThermosaccDry | cds-NP_009371.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005455.1:86717-88999:- | gene-YAL031C_VR1 | rna-NM_001178176.1_VR1 | cds-NP_009371.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000002.1:57256-59538:- | gene-YAL031C_ZTW1 | rna-NM_001178176.1_ZTW1 | cds-NP_009371.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047487.1:74815-77097:- | gene-YAL031C_Sparadoxus | rna-NM_001178176.1_Sparadoxus | cds-NP_009371.1_Sparadoxus | 88.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |