Gene name: GIP3
Reference locus (S288C): YPL137C
Gene biotype: protein_coding
Description: GLC7-interacting protein 3; Cytoplasmic protein that regulates protein phosphatase 1 Glc7p; overexpression relocalizes Glc7p from the nucleus and prevents chromosome segregation; may interact with ribosomes, based on co-purification experiments; GIP3 has a paralog, HER1, that arose from the whole genome duplication
Top 10 interactors (score): GLC7 (0.897); PYC1 (0.802); LTP1 (0.75); GIP4 (0.745); SLM3 (0.68); SEC16 (0.674); BNI4 (0.647); SOL2 (0.619); GAC1 (0.618); YPR064W (0.615); PEX31 (0.568); SOL1 (0.563); RGC1 (0.559); TRA1 (0.547); GLC8 (0.526); TOM1 (0.524); GRX4 (0.522); IPL1 (0.502); CST6 (0.499); GLO3 (0.47)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:270471-274301:- | gene-YPL137C_AKU4011 | rna-NM_001183951.1_AKU4011 | cds-NP_015188.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:476158-479988:- | gene-YPL137C_BG1 | rna-NM_001183951.1_BG1 | cds-NP_015188.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:296467-300297:- | gene-YPL137C_Bruggeman | rna-NM_001183951.1_Bruggeman | cds-NP_015188.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:293145-296975:- | gene-YPL137C_CAT1 | rna-NM_001183951.1_CAT1 | cds-NP_015188.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:274538-278368:- | gene-YPL137C_CBS1585 | rna-NM_001183951.1_CBS1585 | cds-NP_015188.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:289209-293039:- | gene-YPL137C_CBS436 | rna-NM_001183951.1_CBS436 | cds-NP_015188.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:279213-283043:- | gene-YPL137C_CBS6412 | rna-NM_001183951.1_CBS6412 | cds-NP_015188.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:271177-275007:- | gene-YPL137C_CBS6413 | rna-NM_001183951.1_CBS6413 | cds-NP_015188.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:292719-296549:- | gene-YPL137C_CENPK1137D | rna-NM_001183951.1_CENPK1137D | cds-NP_015188.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:269158-272988:- | gene-YPL137C_EthanolRed | rna-NM_001183951.1_EthanolRed | cds-NP_015188.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:276750-280580:- | gene-YPL137C_FaliES1 | rna-NM_001183951.1_FaliES1 | cds-NP_015188.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000007.1:85265-89095:+ | gene-YPL137C_JAY291 | rna-NM_001183951.1_JAY291 | cds-NP_015188.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:287711-291541:- | gene-YPL137C_MUCL30387 | rna-NM_001183951.1_MUCL30387 | cds-NP_015188.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:285725-289555:- | gene-YPL137C_MUCL30388 | rna-NM_001183951.1_MUCL30388 | cds-NP_015188.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:267867-271697:- | gene-YPL137C_MUCL39482 | rna-NM_001183951.1_MUCL39482 | cds-NP_015188.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:325108-328938:- | gene-YPL137C_MUCL42920 | rna-NM_001183951.1_MUCL42920 | cds-NP_015188.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:292800-296630:- | gene-YPL137C_NCIM3186 | rna-NM_001183951.1_NCIM3186 | cds-NP_015188.1_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:274327-278157:- | gene-YPL137C_NCYC1407 | rna-NM_001183951.1_NCYC1407 | cds-NP_015188.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:281773-285615:- | gene-YPL137C_PE2H3 | rna-NM_001183951.1_PE2H3 | cds-NP_015188.1_PE2H3 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:281408-285238:- | gene-YPL137C_PE2H4 | rna-NM_001183951.1_PE2H4 | cds-NP_015188.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:292817-296647:- | gene-YPL137C_S288C | rna-NM_001183951.1_S288C | cds-NP_015188.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000012.1:77035-80865:+ | gene-YPL137C_SA1 | rna-NM_001183951.1_SA1 | cds-NP_015188.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:276548-280378:- | gene-YPL137C_ThermosaccDry | rna-NM_001183951.1_ThermosaccDry | cds-NP_015188.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:291529-295359:- | gene-YPL137C_VR1 | rna-NM_001183951.1_VR1 | cds-NP_015188.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:275879-279709:- | gene-YPL137C_ZTW1 | rna-NM_001183951.1_ZTW1 | cds-NP_015188.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:277583-281434:- | gene-YPL137C_Sparadoxus | rna-NM_001183951.1_Sparadoxus | cds-NP_015188.1_Sparadoxus | 87.7 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |