Gene name: GIM5
Reference locus (S288C): YML094W
Gene biotype: protein_coding
Description: Prefoldin subunit 5; Subunit of the heterohexameric cochaperone prefoldin complex; prefoldin binds specifically to cytosolic chaperonin and transfers target proteins to it; prefoldin complex also localizes to chromatin of actively transcribed genes in the nucleus and facilitates transcriptional elongation
Top 10 interactors (score): GIM3 (0.999); PAC10 (0.999); YKE2 (0.999); GIM4 (0.999); PFD1 (0.987); TCP1 (0.942); SDD2 (0.939); CCT8 (0.924); DBP3 (0.916); EMG1 (0.908); LSM3 (0.902); SMD2 (0.9); PRE8 (0.896); LSM8 (0.896); SMX2 (0.896); SMX3 (0.896); TMA7 (0.896); TIM12 (0.896); FPR1 (0.896); HNT1 (0.896)
Homologues (species, bitscore): PFDN5 (Homo sapiens, 107.8); Pfdn5 (Mus musculus, 107.8); pfdn5 (Danio rerio, 100.1); pfdn5 (Xenopus tropicalis, 97.4); CG7048 (Drosophila melanogaster, 102.1); pfd-5 (Caenorhabditis elegans, 73.2); PFD5 (Arabidopsis thaliana, 73.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:75997-76571:+ | gene-YML094W_AKU4011 | rna-NM_001182453.1_AKU4011 | cds-NP_013616.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:399558-400132:- | gene-YML094W_BG1 | rna-NM_001182453.1_BG1 | cds-NP_013616.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:82251-82825:+ | gene-YML094W_Bruggeman | rna-NM_001182453.1_Bruggeman | cds-NP_013616.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:83809-84383:+ | gene-YML094W_CAT1 | rna-NM_001182453.1_CAT1 | cds-NP_013616.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:75998-76572:+ | gene-YML094W_CBS1585 | rna-NM_001182453.1_CBS1585 | cds-NP_013616.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:81990-82564:+ | gene-YML094W_CBS436 | rna-NM_001182453.1_CBS436 | cds-NP_013616.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:76762-77336:+ | gene-YML094W_CBS6412 | rna-NM_001182453.1_CBS6412 | cds-NP_013616.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:75226-75800:+ | gene-YML094W_CBS6413 | rna-NM_001182453.1_CBS6413 | cds-NP_013616.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:76865-77439:+ | gene-YML094W_CENPK1137D | rna-NM_001182453.1_CENPK1137D | cds-NP_013616.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:76502-77076:+ | gene-YML094W_EthanolRed | rna-NM_001182453.1_EthanolRed | cds-NP_013616.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:76779-77353:+ | gene-YML094W_FaliES1 | rna-NM_001182453.1_FaliES1 | cds-NP_013616.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000345.1:12829-13403:- | gene-YML094W_JAY291 | rna-NM_001182453.1_JAY291 | cds-NP_013616.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:80696-81270:+ | gene-YML094W_MUCL30387 | rna-NM_001182453.1_MUCL30387 | cds-NP_013616.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:83920-84494:+ | gene-YML094W_MUCL30388 | rna-NM_001182453.1_MUCL30388 | cds-NP_013616.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:76012-76586:+ | gene-YML094W_MUCL39482 | rna-NM_001182453.1_MUCL39482 | cds-NP_013616.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:80810-81384:+ | gene-YML094W_MUCL42920 | rna-NM_001182453.1_MUCL42920 | cds-NP_013616.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:82229-82803:+ | gene-YML094W_NCIM3186 | rna-NM_001182453.1_NCIM3186 | cds-NP_013616.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:76806-77380:+ | gene-YML094W_NCYC1407 | rna-NM_001182453.1_NCYC1407 | cds-NP_013616.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:82239-82813:+ | gene-YML094W_PE2H3 | rna-NM_001182453.1_PE2H3 | cds-NP_013616.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:82177-82751:+ | gene-YML094W_PE2H4 | rna-NM_001182453.1_PE2H4 | cds-NP_013616.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:82275-82849:+ | gene-YML094W_S288C | rna-NM_001182453.1_S288C | cds-NP_013616.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000054.1:74243-74817:+ | gene-YML094W_SA1 | rna-NM_001182453.1_SA1 | cds-NP_013616.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:76075-76649:+ | gene-YML094W_ThermosaccDry | rna-NM_001182453.1_ThermosaccDry | cds-NP_013616.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:80458-81032:+ | gene-YML094W_VR1 | rna-NM_001182453.1_VR1 | cds-NP_013616.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:55576-56150:+ | gene-YML094W_ZTW1 | rna-NM_001182453.1_ZTW1 | cds-NP_013616.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:86874-87445:+ | gene-YML094W_Sparadoxus | rna-NM_001182453.1_Sparadoxus | cds-NP_013616.1_Sparadoxus | 91.6 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |