GID8 (YMR135C)


Gene profile

Gene name: GID8
Reference locus (S288C): YMR135C
Gene biotype: protein_coding

Description: Glucose-induced degradation protein 8; Subunit of GID Complex, binds strongly to central component Vid30p; GID Complex is involved in proteasome-dependent catabolite inactivation of fructose-1,6-bisphosphatase; recruits Rmd5p, Fyv10 and Vid28p to GID Complex; contains LisH, CTLH, and CRA domains that mediate binding to Vid30p (LisH) and Rmd5p and Vid28p (CTLH and CRA); dosage-dependent regulator of START; Belongs to the GID8 family

Top 10 interactors (score): VID24 (0.999); RMD5 (0.999); VID28 (0.999); FYV10 (0.999); VID30 (0.999); GID7 (0.999); SEC4 (0.977); YGR066C (0.836); MOH1 (0.83); YDL176W (0.801); UBC8 (0.786); DCR2 (0.719); MAK10 (0.701); FBP1 (0.697); RRP14 (0.679); NUF2 (0.679); ATP16 (0.675); DCC1 (0.662); NNR2 (0.659); HGH1 (0.659)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:578170-579534:- gene-YMR135C_AKU4011 rna-NM_001182636.1_AKU4011 cds-NP_013854.1_AKU4011 99.2 99.7 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000068.1:92977-94347:+ gene-YMR135C_BG1 rna-NM_001182636.1_BG1 cds-NP_013854.1_BG1 99.7 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:521369-522736:- gene-YMR135C_Bruggeman rna-NM_001182636.1_Bruggeman cds-NP_013854.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:523583-524950:- gene-YMR135C_CAT1 rna-NM_001182636.1_CAT1 cds-NP_013854.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:511094-512458:- gene-YMR135C_CBS1585 rna-NM_001182636.1_CBS1585 cds-NP_013854.1_CBS1585 99.3 99.7 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:514985-516352:- gene-YMR135C_CBS436 rna-NM_001182636.1_CBS436 cds-NP_013854.1_CBS436 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:624087-625451:- gene-YMR135C_CBS6412 rna-NM_001182636.1_CBS6412 cds-NP_013854.1_CBS6412 99.2 99.7 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:509654-511018:- gene-YMR135C_CBS6413 rna-NM_001182636.1_CBS6413 cds-NP_013854.1_CBS6413 99.3 99.7 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:533187-534551:- gene-YMR135C_CENPK1137D rna-NM_001182636.1_CENPK1137D cds-NP_013854.1_CENPK1137D 99.2 99.7 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005483.1:509284-510648:- gene-YMR135C_EthanolRed rna-NM_001182636.1_EthanolRed cds-NP_013854.1_EthanolRed 99.3 99.7 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:515225-516589:- gene-YMR135C_FaliES1 rna-NM_001182636.1_FaliES1 cds-NP_013854.1_FaliES1 99.2 99.7 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000294.1:10380-11750:+ gene-YMR135C_JAY291 rna-NM_001182636.1_JAY291 cds-NP_013854.1_JAY291 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:516094-517461:- gene-YMR135C_MUCL30387 rna-NM_001182636.1_MUCL30387 cds-NP_013854.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:521622-522989:- gene-YMR135C_MUCL30388 rna-NM_001182636.1_MUCL30388 cds-NP_013854.1_MUCL30388 99.7 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:511795-513159:- gene-YMR135C_MUCL39482 rna-NM_001182636.1_MUCL39482 cds-NP_013854.1_MUCL39482 99.3 99.7 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:518123-519490:- gene-YMR135C_MUCL42920 rna-NM_001182636.1_MUCL42920 cds-NP_013854.1_MUCL42920 99.9 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:538643-540010:- gene-YMR135C_NCIM3186 rna-NM_001182636.1_NCIM3186 cds-NP_013854.1_NCIM3186 99.4 100.0 Verified 1 1 0 False False False True False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:511433-512797:- gene-YMR135C_NCYC1407 rna-NM_001182636.1_NCYC1407 cds-NP_013854.1_NCYC1407 99.2 99.7 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:521884-523254:- gene-YMR135C_PE2H3 rna-NM_001182636.1_PE2H3 cds-NP_013854.1_PE2H3 99.7 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:522339-523706:- gene-YMR135C_PE2H4 rna-NM_001182636.1_PE2H4 cds-NP_013854.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:538689-540056:- gene-YMR135C_S288C rna-NM_001182636.1_S288C cds-NP_013854.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000048.1:31215-32582:+ gene-YMR135C_SA1 rna-NM_001182636.1_SA1 cds-NP_013854.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:511681-513045:- gene-YMR135C_ThermosaccDry rna-NM_001182636.1_ThermosaccDry cds-NP_013854.1_ThermosaccDry 99.3 99.7 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:524393-525760:- gene-YMR135C_VR1 rna-NM_001182636.1_VR1 cds-NP_013854.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000027.1:486826-488190:- gene-YMR135C_ZTW1 rna-NM_001182636.1_ZTW1 cds-NP_013854.1_ZTW1 99.2 99.7 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:523146-524510:- gene-YMR135C_Sparadoxus rna-NM_001182636.1_Sparadoxus cds-NP_013854.1_Sparadoxus 89.4 99.7 Verified 1 1 1 False True False False False

Additional files