GID10 (YGR066C)


Gene profile

Gene name: GID10
Reference locus (S288C): YGR066C
Gene biotype: protein_coding

Description: Glucose-induced degradation protein 4; Uncharacterized protein YGR066C; Putative protein of unknown function

Top 10 interactors (score): RMD5 (0.886); VID30 (0.873); VID28 (0.858); FYV10 (0.849); GID7 (0.841); GID8 (0.836); SPG4 (0.799); BOP2 (0.783); RCH1 (0.779); YDR366C (0.749); YJL107C (0.746); NQM1 (0.718); VID24 (0.714); EGO4 (0.696); APL5 (0.65); RTC3 (0.648); APL6 (0.614); FIT1 (0.57); FBP1 (0.51); ENP1 (0.509)

Homologues (species, bitscore): GID4 (Homo sapiens, 91.7); Gid4 (Mus musculus, 92.8); GID4 (Danio rerio, 97.1); gid4 (Xenopus tropicalis, 90.9); AT2G37680 (Arabidopsis thaliana, 69.3)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:604613-605491:- gene-YGR066C_AKU4011 rna-NM_001181195.3_AKU4011 cds-NP_011580.3_AKU4011 99.4 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000173.1:40878-41756:- gene-YGR066C_BG1 rna-NM_001181195.3_BG1 cds-NP_011580.3_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:606901-607779:- gene-YGR066C_Bruggeman rna-NM_001181195.3_Bruggeman cds-NP_011580.3_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:605331-606209:- gene-YGR066C_CAT1 rna-NM_001181195.3_CAT1 cds-NP_011580.3_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:605926-606804:- gene-YGR066C_CBS1585 rna-NM_001181195.3_CBS1585 cds-NP_011580.3_CBS1585 99.5 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005349.1:607223-608101:- gene-YGR066C_CBS436 rna-NM_001181195.3_CBS436 cds-NP_011580.3_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:598722-599600:- gene-YGR066C_CBS6412 rna-NM_001181195.3_CBS6412 cds-NP_011580.3_CBS6412 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:602720-603598:- gene-YGR066C_CBS6413 rna-NM_001181195.3_CBS6413 cds-NP_011580.3_CBS6413 99.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:620639-621517:- gene-YGR066C_CENPK1137D rna-NM_001181195.3_CENPK1137D cds-NP_011580.3_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:592855-593733:- gene-YGR066C_EthanolRed rna-NM_001181195.3_EthanolRed cds-NP_011580.3_EthanolRed 99.4 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:596334-597212:- gene-YGR066C_FaliES1 rna-NM_001181195.3_FaliES1 cds-NP_011580.3_FaliES1 99.5 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000435.1:47282-48160:- gene-YGR066C_JAY291 rna-NM_001181195.3_JAY291 cds-NP_011580.3_JAY291 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:603533-604411:- gene-YGR066C_MUCL30387 rna-NM_001181195.3_MUCL30387 cds-NP_011580.3_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:606933-607811:- gene-YGR066C_MUCL30388 rna-NM_001181195.3_MUCL30388 cds-NP_011580.3_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:601763-602641:- gene-YGR066C_MUCL39482 rna-NM_001181195.3_MUCL39482 cds-NP_011580.3_MUCL39482 99.5 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:611558-612436:- gene-YGR066C_MUCL42920 rna-NM_001181195.3_MUCL42920 cds-NP_011580.3_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:620921-621799:- gene-YGR066C_NCIM3186 rna-NM_001181195.3_NCIM3186 cds-NP_011580.3_NCIM3186 99.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:595942-596820:- gene-YGR066C_NCYC1407 rna-NM_001181195.3_NCYC1407 cds-NP_011580.3_NCYC1407 99.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:599187-600065:- gene-YGR066C_PE2H3 rna-NM_001181195.3_PE2H3 cds-NP_011580.3_PE2H3 99.5 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:604298-605176:- gene-YGR066C_PE2H4 rna-NM_001181195.3_PE2H4 cds-NP_011580.3_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:620921-621799:- gene-YGR066C_S288C rna-NM_001181195.3_S288C cds-NP_011580.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000015.1:47390-48268:- gene-YGR066C_SA1 rna-NM_001181195.3_SA1 cds-NP_011580.3_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:615672-616550:- gene-YGR066C_ThermosaccDry rna-NM_001181195.3_ThermosaccDry cds-NP_011580.3_ThermosaccDry 99.4 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:712612-713490:- gene-YGR066C_VR1 rna-NM_001181195.3_VR1 cds-NP_011580.3_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000015.1:71137-72015:- gene-YGR066C_ZTW1 rna-NM_001181195.3_ZTW1 cds-NP_011580.3_ZTW1 99.6 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:606218-607096:- gene-YGR066C_Sparadoxus rna-NM_001181195.3_Sparadoxus cds-NP_011580.3_Sparadoxus 87.2 99.8 Verified 1 1 1 False True False False False

Additional files