GET2 (YER083C)


Gene profile

Gene name: GET2
Reference locus (S288C): YER083C
Gene biotype: protein_coding

Description: Golgi to ER traffic protein 2; Subunit of the GET complex; involved in insertion of proteins into the ER membrane; required for the retrieval of HDEL proteins from the Golgi to the ER in an ERD2 dependent fashion and for meiotic nuclear division; Belongs to the GET2 family

Top 10 interactors (score): GET1 (0.999); GET3 (0.999); GET4 (0.942); MDY2 (0.925); SGT2 (0.89); ENV10 (0.841); SBH1 (0.82); SBH2 (0.775); YAR028W (0.712); SND1 (0.7); YOR200W (0.674); SED5 (0.613); HRQ1 (0.592); GYP1 (0.59); XRS2 (0.589); UCC1 (0.586); MRPL15 (0.574); YSY6 (0.569); YDL129W (0.569); SEC61 (0.567)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005299.1:319956-320813:- gene-YER083C_AKU4011 rna-NM_001178974.1_AKU4011 cds-NP_011006.2_AKU4011 99.5 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000011.1:104992-105849:+ gene-YER083C_BG1 rna-NM_001178974.1_BG1 cds-NP_011006.2_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005507.1:329546-330403:- gene-YER083C_Bruggeman rna-NM_001178974.1_Bruggeman cds-NP_011006.2_Bruggeman 99.5 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005523.1:323900-324757:- gene-YER083C_CAT1 rna-NM_001178974.1_CAT1 cds-NP_011006.2_CAT1 99.7 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005363.1:319821-320678:- gene-YER083C_CBS1585 rna-NM_001178974.1_CBS1585 cds-NP_011006.2_CBS1585 99.4 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005347.1:321956-322813:- gene-YER083C_CBS436 rna-NM_001178974.1_CBS436 cds-NP_011006.2_CBS436 99.8 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005331.1:319278-320135:- gene-YER083C_CBS6412 rna-NM_001178974.1_CBS6412 cds-NP_011006.2_CBS6412 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005315.1:325268-326125:- gene-YER083C_CBS6413 rna-NM_001178974.1_CBS6413 cds-NP_011006.2_CBS6413 99.5 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001526.1:324088-324945:- gene-YER083C_CENPK1137D rna-NM_001178974.1_CENPK1137D cds-NP_011006.2_CENPK1137D 99.5 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005475.1:320300-321157:- gene-YER083C_EthanolRed rna-NM_001178974.1_EthanolRed cds-NP_011006.2_EthanolRed 99.5 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005539.1:320745-321602:- gene-YER083C_FaliES1 rna-NM_001178974.1_FaliES1 cds-NP_011006.2_FaliES1 99.5 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000153.1:35797-36654:- gene-YER083C_JAY291 rna-NM_001178974.1_JAY291 cds-NP_011006.2_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005411.1:324941-325798:- gene-YER083C_MUCL30387 rna-NM_001178974.1_MUCL30387 cds-NP_011006.2_MUCL30387 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005443.1:320612-321469:- gene-YER083C_MUCL30388 rna-NM_001178974.1_MUCL30388 cds-NP_011006.2_MUCL30388 99.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005283.1:318845-319702:- gene-YER083C_MUCL39482 rna-NM_001178974.1_MUCL39482 cds-NP_011006.2_MUCL39482 99.4 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005427.1:326082-326939:- gene-YER083C_MUCL42920 rna-NM_001178974.1_MUCL42920 cds-NP_011006.2_MUCL42920 99.7 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011814.1:326173-327030:- gene-YER083C_NCIM3186 rna-NM_001178974.1_NCIM3186 cds-NP_011006.2_NCIM3186 99.5 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005267.1:323909-324766:- gene-YER083C_NCYC1407 rna-NM_001178974.1_NCYC1407 cds-NP_011006.2_NCYC1407 99.5 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994144.1:334551-335408:- gene-YER083C_PE2H3 rna-NM_001178974.1_PE2H3 cds-NP_011006.2_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999876.1:324492-325349:- gene-YER083C_PE2H4 rna-NM_001178974.1_PE2H4 cds-NP_011006.2_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001137.3:326174-327031:- gene-YER083C_S288C rna-NM_001178974.1_S288C cds-NP_011006.2_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000023.1:35803-36660:- gene-YER083C_SA1 rna-NM_001178974.1_SA1 cds-NP_011006.2_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005491.1:321542-322399:- gene-YER083C_ThermosaccDry rna-NM_001178974.1_ThermosaccDry cds-NP_011006.2_ThermosaccDry 99.5 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005459.1:322231-323088:- gene-YER083C_VR1 rna-NM_001178974.1_VR1 cds-NP_011006.2_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000009.1:318703-319560:- gene-YER083C_ZTW1 rna-NM_001178974.1_ZTW1 cds-NP_011006.2_ZTW1 99.5 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047491.1:322105-322962:- gene-YER083C_Sparadoxus rna-NM_001178974.1_Sparadoxus cds-NP_011006.2_Sparadoxus 88.2 100.0 Verified 1 1 1 False True False False False

Additional files