Gene name: GEP4
Reference locus (S288C): YHR100C
Gene biotype: protein_coding
Description: Mitochondrial phosphatidylglycerophosphatase (PGP phosphatase); dephosphorylates phosphatidylglycerolphosphate to generate phosphatidylglycerol, an essential step during cardiolipin biosynthesis; null mutant is sensitive to tunicamycin, DTT; Belongs to the GEP4 family
Top 10 interactors (score): CRD1 (0.994); PGS1 (0.989); TAM41 (0.981); ALE1 (0.97); PGC1 (0.928); CDS1 (0.917); PSD1 (0.863); CLD1 (0.856); UPS1 (0.842); TAZ1 (0.825); MDM35 (0.82); UPS2 (0.762); PSD2 (0.757); CHO1 (0.734); PIS1 (0.707); TIM22 (0.695); MDM34 (0.694); FMP30 (0.628); GPT2 (0.613); CHO2 (0.61)
Homologues (species, bitscore): AT3G58830 (Arabidopsis thaliana, 71.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:301026-301583:- | gene-YHR100C_AKU4011 | rna-NM_001179230.1_AKU4011 | cds-NP_011968.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:216316-216873:+ | gene-YHR100C_BG1 | rna-NM_001179230.1_BG1 | cds-NP_011968.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:308322-308879:- | gene-YHR100C_Bruggeman | rna-NM_001179230.1_Bruggeman | cds-NP_011968.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:303472-304029:- | gene-YHR100C_CAT1 | rna-NM_001179230.1_CAT1 | cds-NP_011968.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:300055-300612:- | gene-YHR100C_CBS1585 | rna-NM_001179230.1_CBS1585 | cds-NP_011968.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:297415-297972:- | gene-YHR100C_CBS436 | rna-NM_001179230.1_CBS436 | cds-NP_011968.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:301886-302443:- | gene-YHR100C_CBS6412 | rna-NM_001179230.1_CBS6412 | cds-NP_011968.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:301079-301636:- | gene-YHR100C_CBS6413 | rna-NM_001179230.1_CBS6413 | cds-NP_011968.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:307287-307844:- | gene-YHR100C_CENPK1137D | rna-NM_001179230.1_CENPK1137D | cds-NP_011968.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:359939-360496:- | gene-YHR100C_EthanolRed | rna-NM_001179230.1_EthanolRed | cds-NP_011968.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:301427-301984:- | gene-YHR100C_FaliES1 | rna-NM_001179230.1_FaliES1 | cds-NP_011968.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000045.1:22011-22568:- | gene-YHR100C_JAY291 | rna-NM_001179230.1_JAY291 | cds-NP_011968.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:307798-308355:- | gene-YHR100C_MUCL30387 | rna-NM_001179230.1_MUCL30387 | cds-NP_011968.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:307704-308261:- | gene-YHR100C_MUCL30388 | rna-NM_001179230.1_MUCL30388 | cds-NP_011968.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:300392-300949:- | gene-YHR100C_MUCL39482 | rna-NM_001179230.1_MUCL39482 | cds-NP_011968.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:306647-307204:- | gene-YHR100C_MUCL42920 | rna-NM_001179230.1_MUCL42920 | cds-NP_011968.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:313998-314555:- | gene-YHR100C_NCIM3186 | rna-NM_001179230.1_NCIM3186 | cds-NP_011968.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:302601-303158:- | gene-YHR100C_NCYC1407 | rna-NM_001179230.1_NCYC1407 | cds-NP_011968.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:302047-302604:- | gene-YHR100C_PE2H3 | rna-NM_001179230.1_PE2H3 | cds-NP_011968.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:309474-310031:- | gene-YHR100C_PE2H4 | rna-NM_001179230.1_PE2H4 | cds-NP_011968.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:314116-314673:- | gene-YHR100C_S288C | rna-NM_001179230.1_S288C | cds-NP_011968.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000014.1:44303-44860:+ | gene-YHR100C_SA1 | rna-NM_001179230.1_SA1 | cds-NP_011968.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:302510-303067:- | gene-YHR100C_ThermosaccDry | rna-NM_001179230.1_ThermosaccDry | cds-NP_011968.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:310136-310693:- | gene-YHR100C_VR1 | rna-NM_001179230.1_VR1 | cds-NP_011968.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:293540-294097:- | gene-YHR100C_ZTW1 | rna-NM_001179230.1_ZTW1 | cds-NP_011968.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:299226-299783:- | gene-YHR100C_Sparadoxus | rna-NM_001179230.1_Sparadoxus | cds-NP_011968.1_Sparadoxus | 91.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |