Gene name: GEP3
Reference locus (S288C): YOR205C
Gene biotype: protein_coding
Description: Genetic interactor of prohibitins 3, mitochondrial; Protein required for mitochondrial ribosome small subunit biogenesis; null mutant is defective in respiration and in maturation of 15S rRNA; protein is localized to the mitochondrial inner membrane; null mutant interacts synthetically with prohibitin (Phb1p); Belongs to the TRAFAC class YlqF/YawG GTPase family. GEP3 subfamily
Top 10 interactors (score): MTG2 (0.926); MTG1 (0.848); MRPL4 (0.817); MRPS5 (0.781); PTH4 (0.741); OXR1 (0.702); FMT1 (0.702); MRPL44 (0.702); NOP7 (0.693); NOG1 (0.692); RMD9 (0.688); NAM9 (0.686); GUF1 (0.68); AI2 (0.67); NOC3 (0.666); UTP5 (0.666); PUF3 (0.665); EBP2 (0.654); RPL35B (0.651); SDA1 (0.651)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:716345-718015:- | gene-YOR205C_AKU4011 | rna-NM_001183624.1_AKU4011 | cds-NP_014848.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:118384-120054:- | gene-YOR205C_BG1 | rna-NM_001183624.1_BG1 | cds-NP_014848.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:701180-702850:- | gene-YOR205C_Bruggeman | rna-NM_001183624.1_Bruggeman | cds-NP_014848.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:702458-704128:- | gene-YOR205C_CAT1 | rna-NM_001183624.1_CAT1 | cds-NP_014848.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:699332-701002:- | gene-YOR205C_CBS1585 | rna-NM_001183624.1_CBS1585 | cds-NP_014848.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:698023-699693:- | gene-YOR205C_CBS436 | rna-NM_001183624.1_CBS436 | cds-NP_014848.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:696450-698120:- | gene-YOR205C_CBS6412 | rna-NM_001183624.1_CBS6412 | cds-NP_014848.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:705089-706759:- | gene-YOR205C_CBS6413 | rna-NM_001183624.1_CBS6413 | cds-NP_014848.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:725328-726998:- | gene-YOR205C_CENPK1137D | rna-NM_001183624.1_CENPK1137D | cds-NP_014848.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:692475-694145:- | gene-YOR205C_EthanolRed | rna-NM_001183624.1_EthanolRed | cds-NP_014848.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:697872-699542:- | gene-YOR205C_FaliES1 | rna-NM_001183624.1_FaliES1 | cds-NP_014848.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000381.1:127206-128876:+ | gene-YOR205C_JAY291 | rna-NM_001183624.1_JAY291 | cds-NP_014848.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:705142-706812:- | gene-YOR205C_MUCL30387 | rna-NM_001183624.1_MUCL30387 | cds-NP_014848.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:712559-714229:- | gene-YOR205C_MUCL30388 | rna-NM_001183624.1_MUCL30388 | cds-NP_014848.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:706661-708331:- | gene-YOR205C_MUCL39482 | rna-NM_001183624.1_MUCL39482 | cds-NP_014848.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:716245-717915:- | gene-YOR205C_MUCL42920 | rna-NM_001183624.1_MUCL42920 | cds-NP_014848.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:725453-727123:- | gene-YOR205C_NCIM3186 | rna-NM_001183624.1_NCIM3186 | cds-NP_014848.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:706759-708429:- | gene-YOR205C_NCYC1407 | rna-NM_001183624.1_NCYC1407 | cds-NP_014848.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:706157-707827:- | gene-YOR205C_PE2H3 | rna-NM_001183624.1_PE2H3 | cds-NP_014848.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:716534-718204:- | gene-YOR205C_PE2H4 | rna-NM_001183624.1_PE2H4 | cds-NP_014848.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:725564-727234:- | gene-YOR205C_S288C | rna-NM_001183624.1_S288C | cds-NP_014848.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:135564-137234:- | gene-YOR205C_SA1 | rna-NM_001183624.1_SA1 | cds-NP_014848.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:697057-698727:- | gene-YOR205C_ThermosaccDry | rna-NM_001183624.1_ThermosaccDry | cds-NP_014848.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:760598-762268:- | gene-YOR205C_VR1 | rna-NM_001183624.1_VR1 | cds-NP_014848.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:429969-431639:- | gene-YOR205C_ZTW1 | rna-NM_001183624.1_ZTW1 | cds-NP_014848.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:702947-704617:- | gene-YOR205C_Sparadoxus | rna-NM_001183624.1_Sparadoxus | cds-NP_014848.1_Sparadoxus | 86.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |