Gene name: GEA2
Reference locus (S288C): YEL022W
Gene biotype: protein_coding
Description: Guanine nucleotide exchange factor for ADP ribosylation factors (ARFs); involved in vesicular transport between the Golgi and ER, Golgi organization, and actin cytoskeleton organization; GEA2 has a paralog, GEA1, that arose from the whole genome duplication
Top 10 interactors (score): ARF1 (0.997); ARF2 (0.989); COP1 (0.988); SEC21 (0.984); ARL1 (0.977); ARF3 (0.974); GEA1 (0.969); DRS2 (0.965); SEC7 (0.963); GLO3 (0.961); SEC26 (0.951); USO1 (0.944); YPT1 (0.929); PFY1 (0.929); PIK1 (0.918); GCS1 (0.913); AGE2 (0.91); YEL1 (0.857); RET2 (0.849); YPT31 (0.843)
Homologues (species, bitscore): GBF1 (Homo sapiens, 271.9); Gbf1 (Mus musculus, 266.5); gbf1 (Danio rerio, 273.1); gbf1 (Xenopus tropicalis, 288.9); garz (Drosophila melanogaster, 251.1); gbf-1 (Caenorhabditis elegans, 278.1); GN (Arabidopsis thaliana, 250.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:105456-109835:+ | gene-YEL022W_AKU4011 | rna-NM_001178837.1_AKU4011 | cds-NP_010892.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:316125-320504:- | gene-YEL022W_BG1 | rna-NM_001178837.1_BG1 | cds-NP_010892.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:110857-115236:+ | gene-YEL022W_Bruggeman | rna-NM_001178837.1_Bruggeman | cds-NP_010892.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:107639-112018:+ | gene-YEL022W_CAT1 | rna-NM_001178837.1_CAT1 | cds-NP_010892.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:105397-109776:+ | gene-YEL022W_CBS1585 | rna-NM_001178837.1_CBS1585 | cds-NP_010892.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:107030-111409:+ | gene-YEL022W_CBS436 | rna-NM_001178837.1_CBS436 | cds-NP_010892.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:105676-110055:+ | gene-YEL022W_CBS6412 | rna-NM_001178837.1_CBS6412 | cds-NP_010892.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:110289-114668:+ | gene-YEL022W_CBS6413 | rna-NM_001178837.1_CBS6413 | cds-NP_010892.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:109280-113659:+ | gene-YEL022W_CENPK1137D | rna-NM_001178837.1_CENPK1137D | cds-NP_010892.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:105787-110166:+ | gene-YEL022W_EthanolRed | rna-NM_001178837.1_EthanolRed | cds-NP_010892.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:106046-110425:+ | gene-YEL022W_FaliES1 | rna-NM_001178837.1_FaliES1 | cds-NP_010892.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000398.1:24931-29310:+ | gene-YEL022W_JAY291 | rna-NM_001178837.1_JAY291 | cds-NP_010892.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:109710-114089:+ | gene-YEL022W_MUCL30387 | rna-NM_001178837.1_MUCL30387 | cds-NP_010892.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:105682-110061:+ | gene-YEL022W_MUCL30388 | rna-NM_001178837.1_MUCL30388 | cds-NP_010892.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:104766-109145:+ | gene-YEL022W_MUCL39482 | rna-NM_001178837.1_MUCL39482 | cds-NP_010892.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:109396-113775:+ | gene-YEL022W_MUCL42920 | rna-NM_001178837.1_MUCL42920 | cds-NP_010892.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:111420-115799:+ | gene-YEL022W_NCIM3186 | rna-NM_001178837.1_NCIM3186 | cds-NP_010892.1_NCIM3186 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:109866-114245:+ | gene-YEL022W_NCYC1407 | rna-NM_001178837.1_NCYC1407 | cds-NP_010892.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:113897-118276:+ | gene-YEL022W_PE2H3 | rna-NM_001178837.1_PE2H3 | cds-NP_010892.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:109812-114191:+ | gene-YEL022W_PE2H4 | rna-NM_001178837.1_PE2H4 | cds-NP_010892.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:111421-115800:+ | gene-YEL022W_S288C | rna-NM_001178837.1_S288C | cds-NP_010892.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000020.1:127431-131810:- | gene-YEL022W_SA1 | rna-NM_001178837.1_SA1 | cds-NP_010892.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:106451-110830:+ | gene-YEL022W_ThermosaccDry | rna-NM_001178837.1_ThermosaccDry | cds-NP_010892.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:105986-110365:+ | gene-YEL022W_VR1 | rna-NM_001178837.1_VR1 | cds-NP_010892.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:104809-109187:+ | gene-YEL022W_ZTW1 | rna-NM_001178837.1_ZTW1 | cds-NP_010892.1_ZTW1 | 99.6 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:107988-112363:+ | gene-YEL022W_Sparadoxus | rna-NM_001178837.1_Sparadoxus | cds-NP_010892.1_Sparadoxus | 91.2 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |