Gene name: GEA1
Reference locus (S288C): YJR031C
Gene biotype: protein_coding
Description: Guanine nucleotide exchange factor for ADP ribosylation factors (ARFs); involved in vesicular transport between the Golgi and ER, Golgi organization, and actin cytoskeleton organization; GEA1 has a paralog, GEA2, that arose from the whole genome duplication
Top 10 interactors (score): ARF2 (0.989); SEC21 (0.988); ARF1 (0.987); COP1 (0.973); GEA2 (0.969); ARL1 (0.967); ARF3 (0.965); SEC7 (0.963); GMH1 (0.921); PFY1 (0.92); YEL1 (0.916); YPT31 (0.914); GCS1 (0.913); GLO3 (0.908); PIK1 (0.877); USO1 (0.866); YPT1 (0.861); YPT6 (0.842); SEC26 (0.808); BNI1 (0.794)
Homologues (species, bitscore): GBF1 (Homo sapiens, 248.8); Gbf1 (Mus musculus, 243.0); gbf1 (Danio rerio, 250.4); gbf1 (Xenopus tropicalis, 258.1); garz (Drosophila melanogaster, 245.7); gbf-1 (Caenorhabditis elegans, 251.9); GNL1 (Arabidopsis thaliana, 210.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:458281-462507:- | gene-YJR031C_AKU4011 | rna-NM_001181689.1_AKU4011 | cds-NP_012565.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:150283-154509:+ | gene-YJR031C_BG1 | rna-NM_001181689.1_BG1 | cds-NP_012565.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:472323-476549:- | gene-YJR031C_Bruggeman | rna-NM_001181689.1_Bruggeman | cds-NP_012565.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:476253-480479:- | gene-YJR031C_CAT1 | rna-NM_001181689.1_CAT1 | cds-NP_012565.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:469860-474086:- | gene-YJR031C_CBS1585 | rna-NM_001181689.1_CBS1585 | cds-NP_012565.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:488784-493010:- | gene-YJR031C_CBS436 | rna-NM_001181689.1_CBS436 | cds-NP_012565.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:458066-462292:- | gene-YJR031C_CBS6412 | rna-NM_001181689.1_CBS6412 | cds-NP_012565.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:460307-464533:- | gene-YJR031C_CBS6413 | rna-NM_001181689.1_CBS6413 | cds-NP_012565.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:468954-473180:- | gene-YJR031C_CENPK1137D | rna-NM_001181689.1_CENPK1137D | cds-NP_012565.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:463215-467441:- | gene-YJR031C_EthanolRed | rna-NM_001181689.1_EthanolRed | cds-NP_012565.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:474432-478658:- | gene-YJR031C_FaliES1 | rna-NM_001181689.1_FaliES1 | cds-NP_012565.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000030.1:4926-9152:- | gene-YJR031C_JAY291 | rna-NM_001181689.1_JAY291 | cds-NP_012565.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:472631-476857:- | gene-YJR031C_MUCL30387 | rna-NM_001181689.1_MUCL30387 | cds-NP_012565.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:469176-473402:- | gene-YJR031C_MUCL30388 | rna-NM_001181689.1_MUCL30388 | cds-NP_012565.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:463320-467546:- | gene-YJR031C_MUCL39482 | rna-NM_001181689.1_MUCL39482 | cds-NP_012565.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:468585-472811:- | gene-YJR031C_MUCL42920 | rna-NM_001181689.1_MUCL42920 | cds-NP_012565.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:486565-490791:- | gene-YJR031C_NCIM3186 | rna-NM_001181689.1_NCIM3186 | cds-NP_012565.1_NCIM3186 | 94.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:461159-465385:- | gene-YJR031C_NCYC1407 | rna-NM_001181689.1_NCYC1407 | cds-NP_012565.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:479490-483716:- | gene-YJR031C_PE2H3 | rna-NM_001181689.1_PE2H3 | cds-NP_012565.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:473186-477412:- | gene-YJR031C_PE2H4 | rna-NM_001181689.1_PE2H4 | cds-NP_012565.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:486586-490812:- | gene-YJR031C_S288C | rna-NM_001181689.1_S288C | cds-NP_012565.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:271064-275290:- | gene-YJR031C_SA1 | rna-NM_001181689.1_SA1 | cds-NP_012565.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:468119-472345:- | gene-YJR031C_ThermosaccDry | rna-NM_001181689.1_ThermosaccDry | cds-NP_012565.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:470353-474579:- | gene-YJR031C_VR1 | rna-NM_001181689.1_VR1 | cds-NP_012565.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:448005-452231:- | gene-YJR031C_ZTW1 | rna-NM_001181689.1_ZTW1 | cds-NP_012565.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:472760-476989:- | gene-YJR031C_Sparadoxus | rna-NM_001181689.1_Sparadoxus | cds-NP_012565.1_Sparadoxus | 87.9 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |