GDS1 (YOR355W)


Gene profile

Gene name: GDS1
Reference locus (S288C): YOR355W
Gene biotype: protein_coding

Description: Protein of unknown function; required for growth on glycerol as a carbon source; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies

Top 10 interactors (score): FRS1 (0.822); SNU114 (0.8); NAM9 (0.784); YLR177W (0.744); YBR139W (0.718); YPR127W (0.711); YMR315W (0.71); Q0255 (0.71); YMR130W (0.706); ADH5 (0.7); YLR042C (0.695); YKL071W (0.694); RIB4 (0.671); BDH1 (0.659); HEM2 (0.657); MDS3 (0.619); LPX1 (0.618); FMP45 (0.616); RPL34A (0.614); CSM1 (0.609)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:991721-993289:+ gene-YOR355W_AKU4011 rna-NM_001183775.3_AKU4011 cds-NP_015000.3_AKU4011 99.4 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000078.1:28900-30468:+ gene-YOR355W_BG1 rna-NM_001183775.3_BG1 cds-NP_015000.3_BG1 99.5 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:976538-978106:+ gene-YOR355W_Bruggeman rna-NM_001183775.3_Bruggeman cds-NP_015000.3_Bruggeman 99.9 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:976367-977935:+ gene-YOR355W_CAT1 rna-NM_001183775.3_CAT1 cds-NP_015000.3_CAT1 99.4 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:976131-977699:+ gene-YOR355W_CBS1585 rna-NM_001183775.3_CBS1585 cds-NP_015000.3_CBS1585 99.4 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:970944-972512:+ gene-YOR355W_CBS436 rna-NM_001183775.3_CBS436 cds-NP_015000.3_CBS436 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:205433-207001:+ gene-YOR355W_CBS6412 rna-NM_001183775.3_CBS6412 cds-NP_015000.3_CBS6412 99.4 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:980404-981972:+ gene-YOR355W_CBS6413 rna-NM_001183775.3_CBS6413 cds-NP_015000.3_CBS6413 99.4 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:1004959-1006527:+ gene-YOR355W_CENPK1137D rna-NM_001183775.3_CENPK1137D cds-NP_015000.3_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:220429-221997:+ gene-YOR355W_EthanolRed rna-NM_001183775.3_EthanolRed cds-NP_015000.3_EthanolRed 99.4 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:973258-974826:+ gene-YOR355W_FaliES1 rna-NM_001183775.3_FaliES1 cds-NP_015000.3_FaliES1 99.4 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000078.1:30848-32416:- gene-YOR355W_JAY291 rna-NM_001183775.3_JAY291 cds-NP_015000.3_JAY291 99.9 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:985866-987434:+ gene-YOR355W_MUCL30387 rna-NM_001183775.3_MUCL30387 cds-NP_015000.3_MUCL30387 99.9 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:993881-995449:+ gene-YOR355W_MUCL30388 rna-NM_001183775.3_MUCL30388 cds-NP_015000.3_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:982666-984234:+ gene-YOR355W_MUCL39482 rna-NM_001183775.3_MUCL39482 cds-NP_015000.3_MUCL39482 99.4 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:990272-991840:+ gene-YOR355W_MUCL42920 rna-NM_001183775.3_MUCL42920 cds-NP_015000.3_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:1005026-1006594:+ gene-YOR355W_NCIM3186 rna-NM_001183775.3_NCIM3186 cds-NP_015000.3_NCIM3186 99.4 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:983674-985242:+ gene-YOR355W_NCYC1407 rna-NM_001183775.3_NCYC1407 cds-NP_015000.3_NCYC1407 99.4 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:978933-980501:+ gene-YOR355W_PE2H3 rna-NM_001183775.3_PE2H3 cds-NP_015000.3_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:995285-996853:+ gene-YOR355W_PE2H4 rna-NM_001183775.3_PE2H4 cds-NP_015000.3_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:1005137-1006705:+ gene-YOR355W_S288C rna-NM_001183775.3_S288C cds-NP_015000.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000016.1:109668-111236:+ gene-YOR355W_SA1 rna-NM_001183775.3_SA1 cds-NP_015000.3_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:972428-973996:+ gene-YOR355W_ThermosaccDry rna-NM_001183775.3_ThermosaccDry cds-NP_015000.3_ThermosaccDry 99.4 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:1033686-1035254:+ gene-YOR355W_VR1 rna-NM_001183775.3_VR1 cds-NP_015000.3_VR1 99.6 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000032.1:705160-706728:+ gene-YOR355W_ZTW1 rna-NM_001183775.3_ZTW1 cds-NP_015000.3_ZTW1 99.4 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:978667-980244:+ gene-YOR355W_Sparadoxus rna-NM_001183775.3_Sparadoxus cds-NP_015000.3_Sparadoxus 89.4 100.0 Verified 1 1 1 False True False False False

Additional files