Gene name: GDI1
Reference locus (S288C): YER136W
Gene biotype: protein_coding
Description: Rab GDP-dissociation inhibitor; GDP dissociation inhibitor; regulates vesicle traffic in secretory pathways by regulating the dissociation of GDP from the Sec4/Ypt/rab family of GTP binding proteins
Top 10 interactors (score): YPT1 (0.999); YPT6 (0.999); YPT31 (0.999); SEC4 (0.999); YPT7 (0.999); YPT52 (0.996); VPS21 (0.993); YPT32 (0.99); YPT10 (0.989); MON1 (0.977); MRS6 (0.974); SEC2 (0.968); VPS9 (0.964); BET3 (0.947); YPT53 (0.947); CCZ1 (0.937); SEC18 (0.926); TRS120 (0.912); TRS20 (0.911); TRS23 (0.907)
Homologues (species, bitscore): GDI2 (Homo sapiens, 509.6); Gdi1 (Mus musculus, 511.9); gdi1 (Danio rerio, 520.0); ENSXETP00000020569 (Xenopus tropicalis, 492.3); Gdi (Drosophila melanogaster, 488.8); gdi-1 (Caenorhabditis elegans, 493.0); GDI (Arabidopsis thaliana, 476.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:433366-434721:+ | gene-YER136W_AKU4011 | rna-NM_001179026.1_AKU4011 | cds-NP_011062.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000006.1:1223-2578:+ | gene-YER136W_BG1 | rna-NM_001179026.1_BG1 | cds-NP_011062.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:444037-445392:+ | gene-YER136W_Bruggeman | rna-NM_001179026.1_Bruggeman | cds-NP_011062.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | MBWC01000094.1:3733-5088:- | gene-YER136W_CAT1 | rna-NM_001179026.1_CAT1 | cds-NP_011062.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | MBVS01000084.1:1272-2627:+ | gene-YER136W_CBS1585 | rna-NM_001179026.1_CBS1585 | cds-NP_011062.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:436493-437848:+ | gene-YER136W_CBS436 | rna-NM_001179026.1_CBS436 | cds-NP_011062.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:431687-433042:+ | gene-YER136W_CBS6412 | rna-NM_001179026.1_CBS6412 | cds-NP_011062.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:439232-440587:+ | gene-YER136W_CBS6413 | rna-NM_001179026.1_CBS6413 | cds-NP_011062.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:437388-438743:+ | gene-YER136W_CENPK1137D | rna-NM_001179026.1_CENPK1137D | cds-NP_011062.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:432982-434337:+ | gene-YER136W_EthanolRed | rna-NM_001179026.1_EthanolRed | cds-NP_011062.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:433575-434930:+ | gene-YER136W_FaliES1 | rna-NM_001179026.1_FaliES1 | cds-NP_011062.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000230.1:3447-4802:+ | gene-YER136W_JAY291 | rna-NM_001179026.1_JAY291 | cds-NP_011062.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | MBVX01000097.1:1363-2718:+ | gene-YER136W_MUCL30387 | rna-NM_001179026.1_MUCL30387 | cds-NP_011062.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:436287-437642:+ | gene-YER136W_MUCL30388 | rna-NM_001179026.1_MUCL30388 | cds-NP_011062.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:429137-430492:+ | gene-YER136W_MUCL39482 | rna-NM_001179026.1_MUCL39482 | cds-NP_011062.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:441237-442592:+ | gene-YER136W_MUCL42920 | rna-NM_001179026.1_MUCL42920 | cds-NP_011062.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:439615-440970:+ | gene-YER136W_NCIM3186 | rna-NM_001179026.1_NCIM3186 | cds-NP_011062.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:438596-439951:+ | gene-YER136W_NCYC1407 | rna-NM_001179026.1_NCYC1407 | cds-NP_011062.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:447984-449339:+ | gene-YER136W_PE2H3 | rna-NM_001179026.1_PE2H3 | cds-NP_011062.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:437925-439280:+ | gene-YER136W_PE2H4 | rna-NM_001179026.1_PE2H4 | cds-NP_011062.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:439616-440971:+ | gene-YER136W_S288C | rna-NM_001179026.1_S288C | cds-NP_011062.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000030.1:3425-4780:+ | gene-YER136W_SA1 | rna-NM_001179026.1_SA1 | cds-NP_011062.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:434373-435728:+ | gene-YER136W_ThermosaccDry | rna-NM_001179026.1_ThermosaccDry | cds-NP_011062.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:433656-435011:+ | gene-YER136W_VR1 | rna-NM_001179026.1_VR1 | cds-NP_011062.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:431015-432370:+ | gene-YER136W_ZTW1 | rna-NM_001179026.1_ZTW1 | cds-NP_011062.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:441983-443338:+ | gene-YER136W_Sparadoxus | rna-NM_001179026.1_Sparadoxus | cds-NP_011062.1_Sparadoxus | 93.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |