Gene name: GDH2
Reference locus (S288C): YDL215C
Gene biotype: protein_coding
Description: NAD(+)-dependent glutamate dehydrogenase; degrades glutamate to ammonia and alpha-ketoglutarate; expression sensitive to nitrogen catabolite repression and intracellular ammonia levels; genetically interacts with GDH3 by suppressing stress-induced apoptosis
Top 10 interactors (score): GDH1 (0.996); GLN1 (0.994); GDH3 (0.992); GLT1 (0.991); GAD1 (0.988); PUT2 (0.986); AAT2 (0.975); ALT1 (0.971); AAT1 (0.962); KGD1 (0.947); MDH1 (0.943); CIT2 (0.933); ALT2 (0.928); MDH3 (0.928); IDH2 (0.926); ARG2 (0.923); ARG7 (0.918); ZWF1 (0.916); IDP2 (0.916); MDH2 (0.915)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:54134-57412:- | gene-YDL215C_AKU4011 | rna-NM_001180275.1_AKU4011 | cds-NP_010066.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000077.1:9657-12935:+ | gene-YDL215C_BG1 | rna-NM_001180275.1_BG1 | cds-NP_010066.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:69811-73089:- | gene-YDL215C_Bruggeman | rna-NM_001180275.1_Bruggeman | cds-NP_010066.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:289661-292939:- | gene-YDL215C_CAT1 | rna-NM_001180275.1_CAT1 | cds-NP_010066.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:53009-56287:- | gene-YDL215C_CBS1585 | rna-NM_001180275.1_CBS1585 | cds-NP_010066.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:267892-271170:- | gene-YDL215C_CBS436 | rna-NM_001180275.1_CBS436 | cds-NP_010066.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:53121-56399:- | gene-YDL215C_CBS6412 | rna-NM_001180275.1_CBS6412 | cds-NP_010066.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:70644-73922:- | gene-YDL215C_CBS6413 | rna-NM_001180275.1_CBS6413 | cds-NP_010066.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:69306-72584:- | gene-YDL215C_CENPK1137D | rna-NM_001180275.1_CENPK1137D | cds-NP_010066.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:66580-69858:- | gene-YDL215C_EthanolRed | rna-NM_001180275.1_EthanolRed | cds-NP_010066.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:70907-74185:- | gene-YDL215C_FaliES1 | rna-NM_001180275.1_FaliES1 | cds-NP_010066.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000213.1:25236-28514:- | gene-YDL215C_JAY291 | rna-NM_001180275.1_JAY291 | cds-NP_010066.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:68760-72038:- | gene-YDL215C_MUCL30387 | rna-NM_001180275.1_MUCL30387 | cds-NP_010066.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:276578-279856:- | gene-YDL215C_MUCL30388 | rna-NM_001180275.1_MUCL30388 | cds-NP_010066.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:53852-57130:- | gene-YDL215C_MUCL39482 | rna-NM_001180275.1_MUCL39482 | cds-NP_010066.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:69909-73187:- | gene-YDL215C_MUCL42920 | rna-NM_001180275.1_MUCL42920 | cds-NP_010066.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:70563-73841:- | gene-YDL215C_NCIM3186 | rna-NM_001180275.1_NCIM3186 | cds-NP_010066.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:53808-57086:- | gene-YDL215C_NCYC1407 | rna-NM_001180275.1_NCYC1407 | cds-NP_010066.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:60849-64127:- | gene-YDL215C_PE2H3 | rna-NM_001180275.1_PE2H3 | cds-NP_010066.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:60859-64137:- | gene-YDL215C_PE2H4 | rna-NM_001180275.1_PE2H4 | cds-NP_010066.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:70640-73918:- | gene-YDL215C_S288C | rna-NM_001180275.1_S288C | cds-NP_010066.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000094.1:25044-28322:- | gene-YDL215C_SA1 | rna-NM_001180275.1_SA1 | cds-NP_010066.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:70662-73940:- | gene-YDL215C_ThermosaccDry | rna-NM_001180275.1_ThermosaccDry | cds-NP_010066.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:71616-74894:- | gene-YDL215C_VR1 | rna-NM_001180275.1_VR1 | cds-NP_010066.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:69832-73110:- | gene-YDL215C_ZTW1 | rna-NM_001180275.1_ZTW1 | cds-NP_010066.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:73211-76489:- | gene-YDL215C_Sparadoxus | rna-NM_001180275.1_Sparadoxus | cds-NP_010066.1_Sparadoxus | 91.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |