Gene name: GDA1
Reference locus (S288C): YEL042W
Gene biotype: protein_coding
Description: Guanosine-diphosphatase; Guanosine diphosphatase located in the Golgi; involved in the transport of GDP-mannose into the Golgi lumen, converting GDP to GMP after mannose is transferred to substrates; null mutants are defective in sporulation and pre-meiotic S phase entry; orthologous to human ENTPD6, a meiosis-associated non-obstructive azoospermia (NOA) related gene identified in GWAS studies; Belongs to the GDA1/CD39 NTPase family
Top 10 interactors (score): MNN2 (0.824); KRE2 (0.712); YND1 (0.699); VRG4 (0.697); MUB1 (0.662); ZRG8 (0.66); ERG28 (0.63); KRE1 (0.612); NPP2 (0.61); ARL1 (0.606); GCD11 (0.606); HHY1 (0.574); YEA4 (0.56); IKI3 (0.553); ERG4 (0.537); ARB1 (0.529); YCR007C (0.527); YEF1 (0.525); MNN1 (0.52); GPI13 (0.506)
Homologues (species, bitscore): ENTPD6 (Homo sapiens, 184.5); Entpd6 (Mus musculus, 180.3); entpd6 (Danio rerio, 181.8); entpd6 (Xenopus tropicalis, 175.6); NTPase (Drosophila melanogaster, 159.8); uda-1 (Caenorhabditis elegans, 166.4); APY1 (Arabidopsis thaliana, 146.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:67836-69392:+ | gene-YEL042W_AKU4011 | rna-NM_001178857.1_AKU4011 | cds-NP_010872.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000075.1:11157-12713:- | gene-YEL042W_BG1 | rna-NM_001178857.1_BG1 | cds-NP_010872.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:71976-73532:+ | gene-YEL042W_Bruggeman | rna-NM_001178857.1_Bruggeman | cds-NP_010872.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:69766-71322:+ | gene-YEL042W_CAT1 | rna-NM_001178857.1_CAT1 | cds-NP_010872.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:67781-69337:+ | gene-YEL042W_CBS1585 | rna-NM_001178857.1_CBS1585 | cds-NP_010872.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:69409-70965:+ | gene-YEL042W_CBS436 | rna-NM_001178857.1_CBS436 | cds-NP_010872.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:68033-69589:+ | gene-YEL042W_CBS6412 | rna-NM_001178857.1_CBS6412 | cds-NP_010872.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:72673-74229:+ | gene-YEL042W_CBS6413 | rna-NM_001178857.1_CBS6413 | cds-NP_010872.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:71624-73180:+ | gene-YEL042W_CENPK1137D | rna-NM_001178857.1_CENPK1137D | cds-NP_010872.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:67587-69143:+ | gene-YEL042W_EthanolRed | rna-NM_001178857.1_EthanolRed | cds-NP_010872.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:67850-69406:+ | gene-YEL042W_FaliES1 | rna-NM_001178857.1_FaliES1 | cds-NP_010872.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000022.1:10408-11964:- | gene-YEL042W_JAY291 | rna-NM_001178857.1_JAY291 | cds-NP_010872.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:72034-73590:+ | gene-YEL042W_MUCL30387 | rna-NM_001178857.1_MUCL30387 | cds-NP_010872.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:67891-69447:+ | gene-YEL042W_MUCL30388 | rna-NM_001178857.1_MUCL30388 | cds-NP_010872.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:67150-68706:+ | gene-YEL042W_MUCL39482 | rna-NM_001178857.1_MUCL39482 | cds-NP_010872.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:71783-73339:+ | gene-YEL042W_MUCL42920 | rna-NM_001178857.1_MUCL42920 | cds-NP_010872.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:73770-75326:+ | gene-YEL042W_NCIM3186 | rna-NM_001178857.1_NCIM3186 | cds-NP_010872.1_NCIM3186 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:72244-73800:+ | gene-YEL042W_NCYC1407 | rna-NM_001178857.1_NCYC1407 | cds-NP_010872.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:76269-77825:+ | gene-YEL042W_PE2H3 | rna-NM_001178857.1_PE2H3 | cds-NP_010872.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:72184-73740:+ | gene-YEL042W_PE2H4 | rna-NM_001178857.1_PE2H4 | cds-NP_010872.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:73771-75327:+ | gene-YEL042W_S288C | rna-NM_001178857.1_S288C | cds-NP_010872.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000053.1:11244-12800:- | gene-YEL042W_SA1 | rna-NM_001178857.1_SA1 | cds-NP_010872.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:68249-69805:+ | gene-YEL042W_ThermosaccDry | rna-NM_001178857.1_ThermosaccDry | cds-NP_010872.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:67472-69028:+ | gene-YEL042W_VR1 | rna-NM_001178857.1_VR1 | cds-NP_010872.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:67182-68738:+ | gene-YEL042W_ZTW1 | rna-NM_001178857.1_ZTW1 | cds-NP_010872.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:69832-71387:+ | gene-YEL042W_Sparadoxus | rna-NM_001178857.1_Sparadoxus | cds-NP_010872.1_Sparadoxus | 89.0 | 99.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |