Gene name: GCR2
Reference locus (S288C): YNL199C
Gene biotype: protein_coding
Description: Glycolytic genes transcriptional activator gcr2; Transcriptional activator of genes involved in glycolysis; interacts and functions with the DNA-binding protein Gcr1p
Top 10 interactors (score): GCR1 (0.995); TYE7 (0.921); RAP1 (0.894); MIG1 (0.699); HAP4 (0.674); HAP5 (0.651); RTG3 (0.617); SFP1 (0.606); FHL1 (0.575); RGT1 (0.573); PFK1 (0.558); GCN4 (0.526); ARG80 (0.525); CBF1 (0.524); RTG1 (0.523); SWI6 (0.521); MSN2 (0.499); RPN4 (0.496); STB2 (0.472); KCS1 (0.454)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:258702-260306:- | gene-YNL199C_AKU4011 | rna-NM_001183037.1_AKU4011 | cds-NP_014200.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:162651-164255:- | gene-YNL199C_BG1 | rna-NM_001183037.1_BG1 | cds-NP_014200.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:268750-270354:- | gene-YNL199C_Bruggeman | rna-NM_001183037.1_Bruggeman | cds-NP_014200.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:310992-312596:- | gene-YNL199C_CAT1 | rna-NM_001183037.1_CAT1 | cds-NP_014200.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:259347-260951:- | gene-YNL199C_CBS1585 | rna-NM_001183037.1_CBS1585 | cds-NP_014200.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:327635-329239:- | gene-YNL199C_CBS436 | rna-NM_001183037.1_CBS436 | cds-NP_014200.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:254760-256364:- | gene-YNL199C_CBS6412 | rna-NM_001183037.1_CBS6412 | cds-NP_014200.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:255781-257385:- | gene-YNL199C_CBS6413 | rna-NM_001183037.1_CBS6413 | cds-NP_014200.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:258774-260378:- | gene-YNL199C_CENPK1137D | rna-NM_001183037.1_CENPK1137D | cds-NP_014200.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:255670-257274:- | gene-YNL199C_EthanolRed | rna-NM_001183037.1_EthanolRed | cds-NP_014200.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:251583-253187:- | gene-YNL199C_FaliES1 | rna-NM_001183037.1_FaliES1 | cds-NP_014200.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000260.1:65180-66784:+ | gene-YNL199C_JAY291 | rna-NM_001183037.1_JAY291 | cds-NP_014200.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:264537-266141:- | gene-YNL199C_MUCL30387 | rna-NM_001183037.1_MUCL30387 | cds-NP_014200.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:298903-300507:- | gene-YNL199C_MUCL30388 | rna-NM_001183037.1_MUCL30388 | cds-NP_014200.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:256586-258190:- | gene-YNL199C_MUCL39482 | rna-NM_001183037.1_MUCL39482 | cds-NP_014200.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:258953-260557:- | gene-YNL199C_MUCL42920 | rna-NM_001183037.1_MUCL42920 | cds-NP_014200.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:264895-266499:- | gene-YNL199C_NCIM3186 | rna-NM_001183037.1_NCIM3186 | cds-NP_014200.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:258676-260280:- | gene-YNL199C_NCYC1407 | rna-NM_001183037.1_NCYC1407 | cds-NP_014200.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:255588-257192:- | gene-YNL199C_PE2H3 | rna-NM_001183037.1_PE2H3 | cds-NP_014200.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:254976-256580:- | gene-YNL199C_PE2H4 | rna-NM_001183037.1_PE2H4 | cds-NP_014200.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:264926-266530:- | gene-YNL199C_S288C | rna-NM_001183037.1_S288C | cds-NP_014200.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000018.1:147069-148673:+ | gene-YNL199C_SA1 | rna-NM_001183037.1_SA1 | cds-NP_014200.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:252440-254044:- | gene-YNL199C_ThermosaccDry | rna-NM_001183037.1_ThermosaccDry | cds-NP_014200.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:270942-272546:- | gene-YNL199C_VR1 | rna-NM_001183037.1_VR1 | cds-NP_014200.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:162270-163874:- | gene-YNL199C_ZTW1 | rna-NM_001183037.1_ZTW1 | cds-NP_014200.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:262782-264386:- | gene-YNL199C_Sparadoxus | rna-NM_001183037.1_Sparadoxus | cds-NP_014200.1_Sparadoxus | 90.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |