Gene name: GAT4
Reference locus (S288C): YIR013C
Gene biotype: protein_coding
Description: Protein containing GATA family zinc finger motifs; involved in spore wall assembly; sequence similarity to GAT3, and the double mutant gat3 gat4 exhibits reduced dityrosine fluorescence relative to the single mutants
Top 10 interactors (score): YNR063W (0.744); CTS2 (0.699); SPS18 (0.671); SMP1 (0.641); CRR1 (0.62); MIG3 (0.604); SKO1 (0.604); NCB2 (0.572); SPR1 (0.572); MCM1 (0.554); BAS1 (0.548); NHP6B (0.543); ARG80 (0.533); RLM1 (0.498); RME1 (0.471); YHP1 (0.46); ACT1 (0.451); GIS1 (0.446); ARP1 (0.442); ARP9 (0.442)
Homologues (species, bitscore): GATA13 (Arabidopsis thaliana, 53.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:379361-379726:- | gene-YIR013C_AKU4011 | rna-NM_001179535.3_AKU4011 | cds-NP_012278.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000072.1:46848-47213:+ | gene-YIR013C_BG1 | rna-NM_001179535.3_BG1 | cds-NP_012278.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:383781-384146:- | gene-YIR013C_Bruggeman | rna-NM_001179535.3_Bruggeman | cds-NP_012278.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:370493-370858:- | gene-YIR013C_CAT1 | rna-NM_001179535.3_CAT1 | cds-NP_012278.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:379392-379757:- | gene-YIR013C_CBS1585 | rna-NM_001179535.3_CBS1585 | cds-NP_012278.3_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:372063-372428:- | gene-YIR013C_CBS436 | rna-NM_001179535.3_CBS436 | cds-NP_012278.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:374879-375244:- | gene-YIR013C_CBS6412 | rna-NM_001179535.3_CBS6412 | cds-NP_012278.3_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:371470-371835:- | gene-YIR013C_CBS6413 | rna-NM_001179535.3_CBS6413 | cds-NP_012278.3_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:372076-372441:- | gene-YIR013C_CENPK1137D | rna-NM_001179535.3_CENPK1137D | cds-NP_012278.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:362443-362808:- | gene-YIR013C_EthanolRed | rna-NM_001179535.3_EthanolRed | cds-NP_012278.3_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:381169-381534:- | gene-YIR013C_FaliES1 | rna-NM_001179535.3_FaliES1 | cds-NP_012278.3_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000009.1:10430-10795:+ | gene-YIR013C_JAY291 | rna-NM_001179535.3_JAY291 | cds-NP_012278.3_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:381025-381390:- | gene-YIR013C_MUCL30387 | rna-NM_001179535.3_MUCL30387 | cds-NP_012278.3_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:377806-378171:- | gene-YIR013C_MUCL30388 | rna-NM_001179535.3_MUCL30388 | cds-NP_012278.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:380029-380394:- | gene-YIR013C_MUCL39482 | rna-NM_001179535.3_MUCL39482 | cds-NP_012278.3_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:383594-383959:- | gene-YIR013C_MUCL42920 | rna-NM_001179535.3_MUCL42920 | cds-NP_012278.3_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:380019-380384:- | gene-YIR013C_NCIM3186 | rna-NM_001179535.3_NCIM3186 | cds-NP_012278.3_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:384255-384620:- | gene-YIR013C_NCYC1407 | rna-NM_001179535.3_NCYC1407 | cds-NP_012278.3_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:374077-374442:- | gene-YIR013C_PE2H3 | rna-NM_001179535.3_PE2H3 | cds-NP_012278.3_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:368783-369148:- | gene-YIR013C_PE2H4 | rna-NM_001179535.3_PE2H4 | cds-NP_012278.3_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:380019-380384:- | gene-YIR013C_S288C | rna-NM_001179535.3_S288C | cds-NP_012278.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000066.1:54880-55245:- | gene-YIR013C_SA1 | rna-NM_001179535.3_SA1 | cds-NP_012278.3_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:378773-379138:- | gene-YIR013C_ThermosaccDry | rna-NM_001179535.3_ThermosaccDry | cds-NP_012278.3_ThermosaccDry | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:374852-375217:- | gene-YIR013C_VR1 | rna-NM_001179535.3_VR1 | cds-NP_012278.3_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:352772-353137:- | gene-YIR013C_ZTW1 | rna-NM_001179535.3_ZTW1 | cds-NP_012278.3_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:374172-374537:- | gene-YIR013C_Sparadoxus | rna-NM_001179535.3_Sparadoxus | cds-NP_012278.3_Sparadoxus | 90.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |