Gene name: GAP1
Reference locus (S288C): YKR039W
Gene biotype: protein_coding
Description: General amino acid permease; Gap1p senses the presence of amino acid substrates to regulate localization to the plasma membrane when needed; essential for invasive growth
Top 10 interactors (score): MEP2 (0.995); RSP5 (0.932); BUL1 (0.931); SHR3 (0.925); PMA1 (0.925); BUL2 (0.902); AVT5 (0.9); FUR4 (0.897); GLN3 (0.891); MEP1 (0.888); NPR1 (0.865); LST4 (0.853); SSY1 (0.846); GAT1 (0.839); PTR3 (0.831); ALY2 (0.819); SSY5 (0.811); DAL80 (0.81); DUR1,2 (0.803); AGP1 (0.793)
Homologues (species, bitscore): SLC7A4 (Homo sapiens, 58.5); Slc7a8 (Mus musculus, 57.4); slc7a8b (Danio rerio, 53.5); slc7a4 (Xenopus tropicalis, 63.2); aat-2 (Caenorhabditis elegans, 62.4); CAT4 (Arabidopsis thaliana, 57.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:500702-502510:+ | gene-YKR039W_AKU4011 | rna-NM_001179829.3_AKU4011 | cds-NP_012965.3_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:140967-142775:- | gene-YKR039W_BG1 | rna-NM_001179829.3_BG1 | cds-NP_012965.3_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:522879-524687:+ | gene-YKR039W_Bruggeman | rna-NM_001179829.3_Bruggeman | cds-NP_012965.3_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:518378-520186:+ | gene-YKR039W_CAT1 | rna-NM_001179829.3_CAT1 | cds-NP_012965.3_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:513443-515251:+ | gene-YKR039W_CBS1585 | rna-NM_001179829.3_CBS1585 | cds-NP_012965.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:512282-514090:+ | gene-YKR039W_CBS436 | rna-NM_001179829.3_CBS436 | cds-NP_012965.3_CBS436 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:497604-499412:+ | gene-YKR039W_CBS6412 | rna-NM_001179829.3_CBS6412 | cds-NP_012965.3_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:513272-515080:+ | gene-YKR039W_CBS6413 | rna-NM_001179829.3_CBS6413 | cds-NP_012965.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:514875-516683:+ | gene-YKR039W_CENPK1137D | rna-NM_001179829.3_CENPK1137D | cds-NP_012965.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:511008-512816:+ | gene-YKR039W_EthanolRed | rna-NM_001179829.3_EthanolRed | cds-NP_012965.3_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:514138-515946:+ | gene-YKR039W_FaliES1 | rna-NM_001179829.3_FaliES1 | cds-NP_012965.3_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000077.1:37838-39646:- | gene-YKR039W_JAY291 | rna-NM_001179829.3_JAY291 | cds-NP_012965.3_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:523277-525085:+ | gene-YKR039W_MUCL30387 | rna-NM_001179829.3_MUCL30387 | cds-NP_012965.3_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:517637-519445:+ | gene-YKR039W_MUCL30388 | rna-NM_001179829.3_MUCL30388 | cds-NP_012965.3_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:512761-514569:+ | gene-YKR039W_MUCL39482 | rna-NM_001179829.3_MUCL39482 | cds-NP_012965.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:518789-520597:+ | gene-YKR039W_MUCL42920 | rna-NM_001179829.3_MUCL42920 | cds-NP_012965.3_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:515052-516860:+ | gene-YKR039W_NCIM3186 | rna-NM_001179829.3_NCIM3186 | cds-NP_012965.3_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:512967-514775:+ | gene-YKR039W_NCYC1407 | rna-NM_001179829.3_NCYC1407 | cds-NP_012965.3_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:537966-539774:+ | gene-YKR039W_PE2H3 | rna-NM_001179829.3_PE2H3 | cds-NP_012965.3_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:522689-524497:+ | gene-YKR039W_PE2H4 | rna-NM_001179829.3_PE2H4 | cds-NP_012965.3_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:515063-516871:+ | gene-YKR039W_S288C | rna-NM_001179829.3_S288C | cds-NP_012965.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000142.1:909-2717:- | gene-YKR039W_SA1 | rna-NM_001179829.3_SA1 | cds-NP_012965.3_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:513394-515202:+ | gene-YKR039W_ThermosaccDry | rna-NM_001179829.3_ThermosaccDry | cds-NP_012965.3_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:512987-514795:+ | gene-YKR039W_VR1 | rna-NM_001179829.3_VR1 | cds-NP_012965.3_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:511401-513209:+ | gene-YKR039W_ZTW1 | rna-NM_001179829.3_ZTW1 | cds-NP_012965.3_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:536842-538650:+ | gene-YKR039W_Sparadoxus | rna-NM_001179829.3_Sparadoxus | cds-NP_012965.3_Sparadoxus | 90.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |